Version 101 (modified by 10 years ago) ( diff ) | ,
---|
Reggie extension for BASE
This package is an extension package to BASE that makes it easier to register biosources and samples.
Documentation
- The README contains information about this package, how to install it and how to compile it.
- Screenshots of Reggie index page for Reggie versions since 1.0.
License
- Reggie 2.18 and newer: GNU Affero General Public License version 3.
- Reggie 1.0 to 2.17.x: GNU General Public License version 3.
Download
Version | Revision | Date | Binary (tar.gz) | BASE Version | Special notes | |
3.4 | 3377 | June 9, 2015 | reggie-3.4.tar.gz (3.8MB) | 3.5 or later | update notes | changelog |
3.3.3 | 3341 | May 19, 2015 | reggie-3.3.3.tar.gz (3.7MB) | 3.5 or later | changelog | |
3.3.2 | 3306 | May 5, 2015 | reggie-3.3.2.tar.gz (3.7MB) | 3.5 or later | changelog | |
3.3.1 | 3281 | April 29, 2015 | reggie-3.3.1.tar.gz (3.7MB) | 3.5 or later | changelog | |
3.3 | 3260 | April 21, 2015 | reggie-3.3.tar.gz (3.7MB) | 3.5 or later | changelog | |
3.2.2 | 3243 | April 13, 2015 | reggie-3.2.2.tar.gz (3.7MB) | 3.4.* | changelog | |
3.2.1 | 3197 | March 19, 2015 | reggie-3.2.1.tar.gz (3.7MB) | 3.4.* | changelog | |
3.2 | 3173 | March 6, 2015 | reggie-3.2.tar.gz (3.7MB) | 3.4.* | update notes | changelog |
3.1 | 3131 | February 10, 2015 | reggie-3.1.tar.gz (3.7MB) | 3.4.0 or later | changelog | |
3.0 | 3097 | January 19, 2015 | reggie-3.0.tar.gz (3.7MB) | 3.4.0 or later | changelog | |
2.18.2 | 3064 | January 7, 2015 | reggie-2.18.2.tar.gz (3.6MB) | 3.3.3 or later | changelog | |
2.18.1 | 3038 | December 15, 2014 | reggie-2.18.1.tar.gz (3.6MB) | 3.3.3 or later | changelog | |
2.18 | 3003 | December 4, 2014 | reggie-2.18.tar.gz (3.6MB) | 3.3.3 or later | changelog | |
2.17.2 | 2958 | November 19, 2014 | reggie-2.17.2.tar.gz (1.2MB) | 3.3.3 or later | changelog | |
2.17.1 | 2941 | November 17, 2014 | reggie-2.17.1.tar.gz (1.2MB) | 3.3.3 or later | changelog | |
2.17 | 2889 | November 3, 2014 | reggie-2.17.tar.gz (1.2MB) | 3.3.2 or later | update notes | changelog |
2.16.3 | 2823 | October 16, 2014 | reggie-2.16.3.tar.gz (1.2MB) | 3.3.1 or later | changelog | |
2.16.2 | 2817 | October 16, 2014 | reggie-2.16.2.tar.gz (1.2MB) | 3.3.1 or later | changelog | |
2.16.1 | 2799 | October 13, 2014 | reggie-2.16.1.tar.gz (1.1MB) | 3.3.1 or later | changelog | |
2.16 | 2734 | October 6, 2014 | reggie-2.16.tar.gz (1.1MB) | 3.3.1 or later | update notes | changelog |
2.15.3 | 2508 | June 16, 2014 | reggie-2.15.3.tar.gz (713kB) | 3.2.2 or later | changelog | |
2.15.2 | 2452 | May 23, 2014 | reggie-2.15.2.tar.gz (709kB) | 3.2.2 or later | update notes | changelog |
2.15.1 | 2410 | May 9, 2014 | reggie-2.15.1.tar.gz (706kB) | 3.2.2 or later | update notes | changelog |
2.15 | 2339 | April 9, 2014 | reggie-2.15.tar.gz (705kB) | 3.2.2 or later | update notes | changelog |
2.14 | 2192 | January 13, 2014 | reggie-2.14.tar.gz (657kB) | 3.2.2 or later | update notes | changelog |
2.13 | 2146 | November 19, 2013 | reggie-2.13.tar.gz (616kB) | 3.2.2 or later | update notes | changelog |
2.12 | 2018 | September 9, 2013 | reggie-2.12.tar.gz (532kB) | 3.2.2 or later | changelog | |
2.11.1 | 1879 | February 22, 2013 | reggie-2.11.1.tar.gz (349kB) | 3.2.0 or later | changelog | |
2.11 | 1862 | February 19, 2013 | reggie-2.11.tar.gz (348kB) | 3.2.0 or later | changelog | |
2.10.2 | 1798 | January 9, 2013 | reggie-2.10.2.tar.gz (294kB) | 3.2.0 or later | changelog | |
2.10.1 | 1786 | December 13, 2012 | reggie-2.10.1.tar.gz (294kB) | 3.2.0 or later | changelog | |
2.10 | 1780 | December 12, 2012 | reggie-2.10.tar.gz (293kB) | 3.2.0 or later | update notes | changelog |
2.9 | 1753 | November 28, 2012 | reggie-2.9.tar.gz (313kB) | 3.1.0 or later | update notes | changelog |
2.8 | 1724 | September 24, 2012 | reggie-2.8.tar.gz (273kB) | 3.1.0 or later | changelog | |
2.7 | 1714 | August 30, 2012 | reggie-2.7.tar.gz (272kB) | 3.1.0 or later | update notes | changelog |
2.6 | 1664 | May 22, 2012 | reggie-2.6.tar.gz (246kB) | 3.1.0 or later | changelog | |
2.5 | 1632 | April 27, 2012 | reggie-2.5.tar.gz (212kB) | 3.1.0 or later | update notes | changelog |
2.4 | 1618 | April 25, 2012 | reggie-2.4.tar.gz (193kB) | 3.0.0 or later | changelog | |
2.3 | 1535 | February 14, 2012 | reggie-2.3.tar.gz (124kB) | 3.0.0 or later | changelog | |
2.2 | 1528 | January 25, 2012 | reggie-2.2.tar.gz (122kB) | 3.0.0 or later | changelog | |
2.1 | 1506 | January 18, 2012 | reggie-2.1.tar.gz (102kB) | 3.0.0 or later | changelog | |
2.0.1 | 1486 | November 30, 2011 | reggie-2.0.1.tar.gz (89kB) | 3.0.0 or later | changelog | |
2.0 | 1465 | November 14, 2011 | reggie-2.0.tar.gz (89kB) | 3.0.0 or later | changelog | |
1.6 | 1462 | November 14, 2011 | reggie-1.6.tar.gz (85kB) | 2.17.1 or later | changelog | |
1.5 | 1377 | June 17, 2011 | reggie-1.5.tar.gz (66kB) | 2.17.1 or later | changelog | |
1.4 | 1364 | May 16, 2011 | reggie-1.4.tar.gz (58kB) | 2.17.1 or later | changelog | |
1.3 | 1356 | April 28, 2011 | reggie-1.3.tar.gz (72kB) | 2.16.0 or later | changelog | |
1.2 | 1339 | April 11, 2011 | reggie-1.2.tar.gz (63kB) | 2.16.0 or later | changelog | |
1.1 | 1323 | March 21, 2011 | reggie-1.1.tar.gz (43kB) | 2.16.0 or later | changelog | |
1.0 | 1314 | March 7, 2011 | reggie-1.0.tar.gz (42kB) | 2.16.0 or later | changelog |
The latest development (maybe unstable; do not use on a production server) revision can be checked out from the repository using the following command:
svn co http://baseplugins.thep.lu.se/svn/extensions/net.sf.basedb.reggie/trunk reggie-devel
Contribute
After making modifications to the source code, compose a clear and concise log message to describe those changes and the reasons for them. Then, send an email to the developers list containing your log message and the output of svn diff (from the top of your subversion working copy). If the community members consider your changes acceptable, someone who has commit privileges will add your changes to the public source code tree. Recall that permission to directly commit changes to the repository is granted on merit - if you demonstrate comprehension of subversion, programming competency, and a team spirit, you will likely be awarded that permission.
Todo
- #413
- Handle re-running a sample on Caliper with Hi-Sense option
- #510
- Consistent use of terms in the lab protocols and Reggie interface
- #532
- reggie QC wizard for additional QC measurements outside of routine
- #584
- Make it possible to use different volumes for different RNA in Create mRNA plate wizard
- #695
- New reporter annotations
- #752
- Schedule new RNAQC from Flagged RNA wizard
- #919
- Include information about deliverd reports in case summary
- #1211
- Release exporter changes due to TMA specimen importer
- #1311
- Changes in frozen tissue importer due to changes in referral forms
- #1630
- Implement support for library preparation that uses Illumina Unique Dual indexes
- #1632
- Include early samples from the ABIM and Hered projects
Attachments (214)
-
reggie-1.0-rc1.tar.gz
(38.9 KB
) - added by 14 years ago.
Reggie 1.0-rc1
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reggie-1.0.tar.gz
(41.2 KB
) - added by 14 years ago.
Reggie 1.0
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reggie-1.1.tar.gz
(42.2 KB
) - added by 14 years ago.
Reggie 1.1
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reggie-1.2.tar.gz
(62.8 KB
) - added by 14 years ago.
Reggie 1.2
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reggie-1.3.tar.gz
(71.1 KB
) - added by 14 years ago.
Reggie 1.3
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reggie-1.4.tar.gz
(57.7 KB
) - added by 14 years ago.
Reggie 1.4
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reggie-1.5.tar.gz
(65.8 KB
) - added by 13 years ago.
Reggie 1.5
- reggie-1.6.tar.gz (84.7 KB ) - added by 13 years ago.
-
reggie-2.0.tar.gz
(88.7 KB
) - added by 13 years ago.
Releasing reggie-2.0
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reggie-2.0.1.tar.gz
(88.8 KB
) - added by 13 years ago.
Reggie 2.0.1
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reggie-2.1.tar.gz
(102.0 KB
) - added by 13 years ago.
Reggie 2.1
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reggie-2.2.tar.gz
(121.5 KB
) - added by 13 years ago.
Reggie 2.2
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reggie-2.3.tar.gz
(123.0 KB
) - added by 13 years ago.
Reggie 2.3
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reggie-2.4-beta.tar.gz
(176.7 KB
) - added by 13 years ago.
Reggie 2.4-beta
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reggie-2.4-beta2.tar.gz
(187.6 KB
) - added by 13 years ago.
Reggie 2.4-beta2
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reggie-2.4-beta3.tar.gz
(192.5 KB
) - added by 13 years ago.
Reggie 2.4-beta3
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reggie-2.4-beta4.tar.gz
(192.8 KB
) - added by 13 years ago.
Reggie 2.4-beta4
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reggie-2.4.tar.gz
(193.0 KB
) - added by 13 years ago.
Reggie 2.4
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reggie-2.5.tar.gz
(211.8 KB
) - added by 13 years ago.
Reggie 2.5
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reggie-2.6-beta.tar.gz
(243.5 KB
) - added by 13 years ago.
Reggie 2.6-beta
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reggie-2.6-beta2.tar.gz
(244.9 KB
) - added by 13 years ago.
Reggie 2.6-beta2
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reggie-2.6.tar.gz
(245.8 KB
) - added by 13 years ago.
Reggie 2.6
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reggie-2.7-beta.tar.gz
(270.9 KB
) - added by 13 years ago.
Reggie 2.7-beta
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reggie-2.7-beta2.tar.gz
(271.2 KB
) - added by 13 years ago.
Reggie 2.7-beta2
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reggie-2.7.tar.gz
(271.2 KB
) - added by 12 years ago.
Reggie 2.7
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reggie-2.8.tar.gz
(272.2 KB
) - added by 12 years ago.
Reggie 2.8
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reggie-2.9.tar.gz
(285.1 KB
) - added by 12 years ago.
Reggie 2.9
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reggie-2.10.tar.gz
(293.0 KB
) - added by 12 years ago.
Reggie 2.10
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reggie-2.10.1.tar.gz
(293.3 KB
) - added by 12 years ago.
Reggie 2.10.1
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reggie-2.10.2.tar.gz
(293.4 KB
) - added by 12 years ago.
Reggie 2.10.2
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reggie-2.11.tar.gz
(347.6 KB
) - added by 12 years ago.
Reggie 2.11
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reggie-2.11.1.tar.gz
(348.7 KB
) - added by 12 years ago.
Reggie 2.11.1
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reggie-2.12-beta-1.tar.gz
(479.2 KB
) - added by 12 years ago.
Reggie 2.12-beta-1
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reggie-2.12-beta-2.tar.gz
(491.8 KB
) - added by 12 years ago.
Reggie 2.12-beta-2
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reggie-2.12-beta-3.tar.gz
(497.8 KB
) - added by 12 years ago.
Reggie 2.12-beta-3
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reggie-2.12-beta-4.tar.gz
(515.8 KB
) - added by 12 years ago.
Reggie 2.12-beta-4
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reggie-2.12-beta-5.tar.gz
(531.5 KB
) - added by 12 years ago.
Reggie 2.12-beta-5
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reggie-2.12.tar.gz
(531.0 KB
) - added by 11 years ago.
Reggie 2.12
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reggie-2.13-beta-1.tar.gz
(609.5 KB
) - added by 11 years ago.
Reggie 2.13-beta-1
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reggie-2.13-beta-2.tar.gz
(614.8 KB
) - added by 11 years ago.
Reggie 2.13-beta-2
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reggie-2.13-beta-3.tar.gz
(623.0 KB
) - added by 11 years ago.
Reggie 2.13-beta-3
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reggie-2.13.tar.gz
(616.0 KB
) - added by 11 years ago.
Reggie 2.13
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reggie-2.14-beta-1.tar.gz
(644.5 KB
) - added by 11 years ago.
Reggie 2.14-beta-1
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reggie-2.14-beta-3.tar.gz
(651.1 KB
) - added by 11 years ago.
Reggie 2.14-beta-3
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reggie-2.14.tar.gz
(656.1 KB
) - added by 11 years ago.
Reggie 2.14
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reggie-2.15-beta-1.tar.gz
(702.4 KB
) - added by 11 years ago.
Reggie 2.15-beta-1
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reggie-2.15-beta-2.tar.gz
(702.5 KB
) - added by 11 years ago.
Reggie 2.15-beta-2
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reggie-2.15.tar.gz
(704.6 KB
) - added by 11 years ago.
Reggie 2.15
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reggie-2.15.1.tar.gz
(705.9 KB
) - added by 11 years ago.
Reggie 2.15.1
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reggie-2.15.2.tar.gz
(708.4 KB
) - added by 11 years ago.
Reggie 2.15.2
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reggie-2.15.3.tar.gz
(712.7 KB
) - added by 10 years ago.
Reggie 2.15.3
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reggie-2.16-alpha-1.tar.gz
(1.1 MB
) - added by 10 years ago.
Reggie 2.16-alpha-1
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reggie-2.16-beta-1.tar.gz
(1.1 MB
) - added by 10 years ago.
Reggie 2.16-beta-1
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reggie-2.16-beta-2.tar.gz
(1.1 MB
) - added by 10 years ago.
Reggie 2.16-beta-2
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reggie-2.16-beta-3.tar.gz
(1.1 MB
) - added by 10 years ago.
Reggie 2.16-beta-3
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reggie-2.16-beta-4.tar.gz
(1.1 MB
) - added by 10 years ago.
Reggie 2.16-beta-4
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reggie-2.16.tar.gz
(1.1 MB
) - added by 10 years ago.
Reggie 2.16
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reggie-2.16.1.tar.gz
(1.1 MB
) - added by 10 years ago.
Reggie 2.16.1
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reggie-2.16.2.tar.gz
(1.2 MB
) - added by 10 years ago.
Reggie 2.16.2
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reggie-2.16.3.tar.gz
(1.2 MB
) - added by 10 years ago.
Reggie 2.16.3
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reggie-2.17-beta-1.tar.gz
(1.2 MB
) - added by 10 years ago.
Reggie 2.17-beta-1
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reggie-2.17.tar.gz
(1.2 MB
) - added by 10 years ago.
Reggie 2.17
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reggie-2.17.1.tar.gz
(1.2 MB
) - added by 10 years ago.
Reggie 2.17.1
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reggie-2.17.2.tar.gz
(1.2 MB
) - added by 10 years ago.
Reggie 2.17.2
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reggie-2.18.tar.gz
(3.6 MB
) - added by 10 years ago.
Reggie 2.18
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reggie-2.18.1.tar.gz
(3.6 MB
) - added by 10 years ago.
Reggie 2.18.1
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reggie-2.18.2.tar.gz
(3.6 MB
) - added by 10 years ago.
Reggie 2.18.2
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reggie-3.0.tar.gz
(3.7 MB
) - added by 10 years ago.
Reggie 3.0
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reggie-3.1.tar.gz
(3.7 MB
) - added by 10 years ago.
Reggie 3.1
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reggie-3.2.tar.gz
(3.7 MB
) - added by 10 years ago.
Reggie 3.2
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reggie-3.2.1.tar.gz
(3.7 MB
) - added by 10 years ago.
Reggie 3.2.1
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reggie-3.2.2.tar.gz
(3.7 MB
) - added by 10 years ago.
Reggie 3.2.2
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reggie-3.3.tar.gz
(3.7 MB
) - added by 10 years ago.
Reggie 3.3
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reggie-3.3.1.tar.gz
(3.7 MB
) - added by 10 years ago.
Reggie 3.3.1
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reggie-3.3.2.tar.gz
(3.7 MB
) - added by 10 years ago.
Reggie 3.3.2
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reggie-3.3.3.tar.gz
(3.7 MB
) - added by 10 years ago.
Reggie 3.3.3
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reggie-3.4.tar.gz
(3.7 MB
) - added by 10 years ago.
Reggie 3.4
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reggie-3.5.tar.gz
(4.0 MB
) - added by 9 years ago.
Reggie 3.5
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reggie-3.6.tar.gz
(4.0 MB
) - added by 9 years ago.
Reggie 3.6
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reggie-3.6.1.tar.gz
(4.0 MB
) - added by 9 years ago.
Reggie 3.6.1
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reggie-3.7.tar.gz
(7.3 MB
) - added by 9 years ago.
Reggie 3.7
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reggie-3.7.1.tar.gz
(7.3 MB
) - added by 9 years ago.
Reggie 3.7.1
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reggie-4.0.tar.gz
(7.3 MB
) - added by 9 years ago.
Reggie 4.0
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reggie-4.1.tar.gz
(7.4 MB
) - added by 9 years ago.
Reggie 4.1
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reggie-4.1.1.tar.gz
(7.4 MB
) - added by 9 years ago.
Reggie 4.1.1
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reggie-4.2.tar.gz
(7.4 MB
) - added by 9 years ago.
Reggie 4.2
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reggie-4.2.1.tar.gz
(7.4 MB
) - added by 9 years ago.
Reggie 4.2.1
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reggie-4.3.tar.gz
(7.6 MB
) - added by 9 years ago.
Reggie 4.3
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reggie-4.3.1.tar.gz
(7.6 MB
) - added by 9 years ago.
Reggie 4.3.1
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reggie-4.4.tar.gz
(7.6 MB
) - added by 9 years ago.
Reggie 4.4
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reggie-4.5.tar.gz
(7.7 MB
) - added by 9 years ago.
Reggie 4.5
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reggie-4.6.tar.gz
(8.1 MB
) - added by 8 years ago.
Reggie 4.6
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reggie-4.7.tar.gz
(8.1 MB
) - added by 8 years ago.
Reggie 4.7
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reggie-4.7.1.tar.gz
(8.1 MB
) - added by 8 years ago.
Reggie 4.7.1
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reggie-4.8.tar.gz
(8.1 MB
) - added by 8 years ago.
Reggie 4.8
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reggie-4.9.tar.gz
(7.4 MB
) - added by 8 years ago.
Reggie 4.9
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reggie-4.9.1.tar.gz
(7.4 MB
) - added by 8 years ago.
Reggie 4.9.1
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reggie-4.9.2.tar.gz
(7.4 MB
) - added by 8 years ago.
Reggie 4.9.2
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reggie-4.9.3.tar.gz
(7.4 MB
) - added by 8 years ago.
Reggie 4.9.3
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reggie-4.9.4.tar.gz
(7.4 MB
) - added by 8 years ago.
Reggie 4.9.4
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reggie-4.10.tar.gz
(7.4 MB
) - added by 7 years ago.
Reggie 4.10
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reggie-4.11.1.tar.gz
(7.4 MB
) - added by 7 years ago.
Reggie 4.11.1
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reggie-4.11.2.tar.gz
(7.4 MB
) - added by 7 years ago.
Reggie 4.11.2
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reggie-4.11.3.tar.gz
(7.4 MB
) - added by 7 years ago.
Reggie 4.11.3
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reggie-4.12-dev.tar.gz
(7.5 MB
) - added by 7 years ago.
Reggie 4.12-dev
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reggie-4.12.tar.gz
(7.5 MB
) - added by 7 years ago.
Reggie 4.12
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reggie-4.13.tar.gz
(7.5 MB
) - added by 7 years ago.
Reggie 4.13
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reggie-4.14.tar.gz
(7.5 MB
) - added by 7 years ago.
Reggie 4.14
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reggie-4.15.tar.gz
(7.5 MB
) - added by 7 years ago.
Reggie 4.15
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reggie-4.16.tar.gz
(7.5 MB
) - added by 7 years ago.
Reggie 4.16
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reggie-4.17.tar.gz
(7.6 MB
) - added by 7 years ago.
Reggie 4.17
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reggie-4.18.tar.gz
(7.6 MB
) - added by 7 years ago.
Reggie 4.18
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reggie-4.19.tar.gz
(4.3 MB
) - added by 6 years ago.
Reggie 4.19
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reggie-4.19.1.tar.gz
(4.3 MB
) - added by 6 years ago.
Reggie 4.19.1
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reggie-4.20.tar.gz
(6.3 MB
) - added by 6 years ago.
Reggie 4.20
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reggie-4.21.tar.gz
(6.3 MB
) - added by 6 years ago.
Reggie 4.21
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reggie-4.22.tar.gz
(18.6 MB
) - added by 6 years ago.
Reggie 4.22
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reggie-4.22.1.tar.gz
(18.6 MB
) - added by 6 years ago.
Reggie 4.22.1
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reggie-4.22.2.tar.gz
(18.6 MB
) - added by 6 years ago.
Reggie 4.22.2
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reggie-4.23.tar.gz
(4.6 MB
) - added by 5 years ago.
Reggie 4.23
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reggie-4.23.1.tar.gz
(4.6 MB
) - added by 5 years ago.
Reggie 4.23.1
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reggie-4.23.2.tar.gz
(4.6 MB
) - added by 5 years ago.
Reggie 4.23.2
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reggie-4.24.tar.gz
(4.7 MB
) - added by 5 years ago.
Reggie 4.24
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reggie-4.24.1.tar.gz
(4.7 MB
) - added by 5 years ago.
Reggie 4.24.1
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reggie-4.25.tar.gz
(4.7 MB
) - added by 5 years ago.
Reggie 4.25
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reggie-4.25.1.tar.gz
(4.7 MB
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Reggie 4.31
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Reggie 4.37.1
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Reggie 4.41.1
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Reggie 4.44
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Reggie 4.45
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Reggie 4.45.1
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Reggie 4.45.2
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Reggie 4.46.1
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Reggie 4.47.1
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Reggie 4.48.5
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Reggie 4.49
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Reggie 4.49.1
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Reggie 4.49.2
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Reggie 4.49.5
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Reggie 4.50
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Reggie 4.50.1
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Reggie 4.52.2
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Reggie 4.53
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Reggie 4.53.1
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Reggie 5.0
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Reggie 5.0.1
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Reggie 5.1
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Reggie 5.1.1
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Reggie 5.2
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Reggie 5.2.1
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Reggie 5.3
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Reggie 5.3.1
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Reggie 5.4
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Reggie 5.4.1
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Reggie 5.5
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Reggie 5.5.1