Illumina plug-ins package for BASE

This package contains plug-ins for the Illumina platform.

Documentation

NOTE! The development of this package has just started. The information on this page will change.

INSTALL describes how to install the plug-in.

README contains general information about the plug-in and hints on how to use it.

License

​GNU General Public License version 2.

Download

This package has not been released yet.

Subversion Access

The latest development (maybe unstable) revision can be checked out from the repository using the following command:

svn co http://lev.thep.lu.se/repository/baseplugins/trunk/net/sf/basedb/illumina illumina-devel

Contribute

After making modifications to the source code, compose a clear and concise log message to describe those changes and the reasons for them. Then, send an email to the developers list containing your log message and the output of svn diff (from the top of your subversion working copy). If the community members consider your changes acceptable, someone who has commit privileges will add your changes to the public source code tree. Recall that permission to directly commit changes to the repository is granted on merit - if you demonstrate comprehension of subversion, programming competency, and a team spirit, you will likely be awarded that permission.

TODO

#463

Illumina expression background correction (version 1.7) does not ask for required permissions to write file