Timeline
Apr 17, 2018:
- 4:48 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- (In [4767]) Refs #1029. Referral form generator update: Design update …
- 4:48 PM Changeset [4767] by
- Refs #1029. Referral form generator update: Design update of referral …
- 2:44 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- Design update of referral form generation: * Referral form …
- 2:15 PM Milestone INCA XML to CSV converter 1.2 completed
- See INCA XML to CSV converter page for more …
- 2:15 PM Ticket #1021 (Add INCA 2.0 columns to the blacklist) closed by
- fixed
- 2:13 PM Changeset [4766] by
- Changes for future release IncaXML2CSV 1.3
- 2:12 PM net.sf.basedb.inca edited by
- Released IncaXML2CSV 1.2 (diff)
- 2:10 PM Changeset [4765] by
- Tagging IncaXML2CSV 1.2
- 2:10 PM Changeset [4764] by
- Preparing to release IncaXML2CSV 1.2
- 2:08 PM Changeset [4763] by
- Preparing for future release Reggie 4.17.
- 2:07 PM Milestone Reggie v4.16 completed
- See Reggie extension page for more information.
- 2:06 PM PluginDownload edited by
- Released Reggie 4.16 (diff)
- 2:05 PM net.sf.basedb.reggie edited by
- Released Reggie 4.16 (diff)
- 2:02 PM Changeset [4762] by
- Tagging Reggie 4.16
- 2:01 PM Changeset [4761] by
- Preparing to release Reggie 4.16
- 1:57 PM Tickets #1022,1025,1026,1031 batch updated by
- fixed
- 1:57 PM Ticket #1042 (The release exporter fails if the release server has a specified port) closed by
- fixed: (In [4760]) Fixes #1042: The release exporter fails if the release …
- 1:57 PM Changeset [4760] by
- Fixes #1042: The release exporter fails if the release server has a …
- 1:48 PM Ticket #1025 (Release exporter should support StringTie data) updated by
- (In [4759]) References #1025: Release exporter should support …
- 1:48 PM Changeset [4759] by
- References #1025: Release exporter should support StringTie data …
- 1:08 PM Ticket #1042 (The release exporter fails if the release server has a specified port) updated by
-
Priority, Type, Component, Owner, Milestone changed
- 1:08 PM Ticket #1042 (The release exporter fails if the release server has a specified port) created by
- The File server item in BASE that is used by the release exporter may …
- 12:48 PM Ticket #1041 (The release exporter should export the QC_GenoTypeHET_PCT annotation) closed by
- fixed: (In [4758]) Fixes #1041: The release exporter should export the …
- 12:48 PM Changeset [4758] by
- Fixes #1041: The release exporter should export the QC_GenoTypeHET_PCT …
- 11:34 AM Ticket #1041 (The release exporter should export the QC_GenoTypeHET_PCT annotation) created by
- As for other annotations from the AlignedSequences item the …
- 9:54 AM Ticket #1036 (Add support for public/private key authentication) closed by
- fixed
- 9:53 AM Ticket #1038 (Add support for SSH connections with private key authentication) closed by
- fixed
Apr 16, 2018:
- 3:37 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- (In [4757]) Refs #1029. MeLuDI updated in error message to refer to …
- 3:37 PM Changeset [4757] by
- Refs #1029. MeLuDI updated in error message to refer to the correct …
- 3:32 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- (In [4756]) Refs #1029. Updates due to version number change to …
- 3:32 PM Changeset [4756] by
-
Refs #1029. Updates due to version number change to "
1.6.0-dev
". … - 2:32 PM Ticket #1035 (Upgrade SSHj library) closed by
- fixed
- 2:31 PM Ticket #1037 (Depend on BASE 3.13) closed by
- fixed
- 1:44 PM Ticket #1038 (Add support for SSH connections with private key authentication) updated by
- (In [4755]) References #1038: Add support for SSH connections with …
- 1:44 PM Changeset [4755] by
- References #1038: Add support for SSH connections with private key …
- 12:51 PM Ticket #1038 (Add support for SSH connections with private key authentication) updated by
- (In [4754]) References #1038: Add support for SSH connections with …
- 12:51 PM Changeset [4754] by
- References #1038: Add support for SSH connections with private key …
- 12:51 PM Ticket #1038 (Add support for SSH connections with private key authentication) updated by
- (In [4753]) References #1038: Add support for SSH connections with …
- 12:51 PM Changeset [4753] by
- References #1038: Add support for SSH connections with private key …
- 11:47 AM Ticket #1038 (Add support for SSH connections with private key authentication) updated by
- (In [4752]) References #1038: Add support for SSH connections with …
- 11:47 AM Changeset [4752] by
- References #1038: Add support for SSH connections with private key …
- 11:44 AM Ticket #1038 (Add support for SSH connections with private key authentication) updated by
- (In [4751]) References #1038: Add support for SSH connections with …
- 11:44 AM Changeset [4751] by
- References #1038: Add support for SSH connections with private key …
- 11:02 AM Ticket #1036 (Add support for public/private key authentication) updated by
- (In [4750]) References #1036: Add support for public/private key …
- 11:02 AM Changeset [4750] by
- References #1036: Add support for public/private key authentication …
- 9:17 AM Ticket #1040 (Set max BASE version to 3.13) updated by
-
Summary changed
- 9:17 AM Ticket #1040 (Set max BASE version to 3.13) closed by
- fixed: (In [4749]) Fixes #1040: Set max BASE version to 3.13
- 9:17 AM Changeset [4749] by
- Fixes #1040: Set max BASE version to 3.13
- 9:13 AM Ticket #1040 (Set max BASE version to 3.13) created by
- BASE 3.13 is going to include BouncyCastle in the core distribution …
- 9:10 AM Ticket #1039 (Remove BouncyCastle jar files) created by
- BASE 3.13 is going to include BouncyCastle in the core distribution …
Apr 13, 2018:
- 2:03 PM Ticket #1036 (Add support for public/private key authentication) updated by
- (In [4748]) References #1036: Add support for public/private key …
- 2:03 PM Changeset [4748] by
- References #1036: Add support for public/private key authentication …
- 1:46 PM net.sf.basedb.opengrid/install edited by
- References #1036. Documented the new configuration options for using … (diff)
- 11:26 AM Ticket #1022 (INCA import/statistics wizards changes due to INCA 2.0) updated by
- (In [4747]) References #1022: INCA import/statistics wizards changes …
- 11:26 AM Changeset [4747] by
- References #1022: INCA import/statistics wizards changes due to INCA …
- 9:18 AM Ticket #1022 (INCA import/statistics wizards changes due to INCA 2.0) updated by
- (In [4746]) References #1022: INCA import/statistics wizards changes …
- 9:18 AM Changeset [4746] by
- References #1022: INCA import/statistics wizards changes due to INCA …
Apr 10, 2018:
- 3:29 PM Ticket #1025 (Release exporter should support StringTie data) updated by
- (In [4745]) References #1025: Release exporter should support …
- 3:29 PM Changeset [4745] by
- References #1025: Release exporter should support StringTie data …
- 1:08 PM Ticket #1034 (Remove expression matrix from release exporter) updated by
- (In [4744]) References #1034: Remove expression matrix from release …
- 1:08 PM Changeset [4744] by
- References #1034: Remove expression matrix from release exporter …
- 1:06 PM Tickets #1025,1034 batch updated by
- (In [4743]) References #1025 and #1034. Removed check that all raw …
- 1:06 PM Changeset [4743] by
- References #1025 and #1034. Removed check that all raw bioassays must …
- 8:58 AM Ticket #1038 (Add support for SSH connections with private key authentication) updated by
-
Description changed
- 8:57 AM Ticket #1038 (Add support for SSH connections with private key authentication) created by
- Implemented in BASE: http://base.thep.lu.se/ticket/2112 We need to …
Apr 9, 2018:
- 11:35 AM Ticket #1036 (Add support for public/private key authentication) updated by
- (In [4742]) References #1036: Add support for public/private key …
- 11:35 AM Changeset [4742] by
- References #1036: Add support for public/private key authentication …
- 9:25 AM Ticket #1036 (Add support for public/private key authentication) updated by
- (In [4741]) References #1036: Add support for public/private key …
- 9:25 AM Changeset [4741] by
- References #1036: Add support for public/private key authentication …
- 8:25 AM Ticket #1037 (Depend on BASE 3.13) updated by
- (In [4740]) References #1037: Depend on BASE 3.13 Updated to BASE …
- 8:25 AM Changeset [4740] by
- References #1037: Depend on BASE 3.13 Updated to BASE 3.13 and …
Apr 6, 2018:
- 1:20 PM Ticket #1037 (Depend on BASE 3.13) reopened by
- 10:38 AM Ticket #1036 (Add support for public/private key authentication) updated by
- I got this to work when using PuTTY key files, but there is a problem …
Apr 5, 2018:
- 12:44 PM Ticket #1037 (Depend on BASE 3.13) closed by
- fixed: (In [4739]) Fixes #1037: Depend on BASE 3.12
- 12:44 PM Changeset [4739] by
- Fixes #1037: Depend on BASE 3.12
- 12:41 PM Ticket #1037 (Depend on BASE 3.13) created by
- Since we are making big changes, it is better to use the latest BASE …
- 12:38 PM Ticket #1035 (Upgrade SSHj library) updated by
- (In [4738]) References #1035: Upgrade SSHj library
- 12:38 PM Changeset [4738] by
- References #1035: Upgrade SSHj library
- 11:37 AM Ticket #1028 (Add support for StringTie data) updated by
- (In [4737]) References #1028: Add support for StringTie data The …
- 11:37 AM Changeset [4737] by
- References #1028: Add support for StringTie data The Level 3 exporter …
- 11:33 AM Ticket #1036 (Add support for public/private key authentication) created by
- Instead of a username/password, it would be nice to be able to use …
- 11:32 AM Ticket #1035 (Upgrade SSHj library) created by
- Latest version is 0.23.0. https://github.com/hierynomus/sshj
- 11:20 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- (In [4736]) Refs #1029. Updates due to version number change to …
- 11:20 AM Changeset [4736] by
-
Refs #1029. Updates due to version number change to "
1.6.0a1
". 1. … - 9:32 AM Ticket #1028 (Add support for StringTie data) updated by
- (In [4735]) References #1028: Add support for StringTie data The …
- 9:32 AM Changeset [4735] by
- References #1028: Add support for StringTie data The Relax …
- 8:55 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- (In [4734]) Refs #1029. Case/sample registration in SCAN-B-rec project …
- 8:55 AM Changeset [4734] by
- Refs #1029. Case/sample registration in SCAN-B-rec project updated for …
- 8:24 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- (In [4733]) Refs #1029. Code fork introduced for case/sample …
- 8:24 AM Changeset [4733] by
- Refs #1029. Code fork introduced for case/sample registration in …
- 7:30 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- Summary of changes to MeLuDI so far: (To be added later)
Apr 4, 2018:
- 3:56 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- (In [4732]) Refs #1029. Specimen tube registration updated in the case …
- 3:56 PM Changeset [4732] by
- Refs #1029. Specimen tube registration updated in the case section …
- 1:54 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- (In [4731]) Refs #1029. …
- 1:47 PM Changeset [4731] by
- Refs #1029. MeLuDI updated in sample report servlet code with debug …
- 12:30 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- (In [4730]) Refs #1029. Specimen tube registration updated in the set …
- 12:30 PM Changeset [4730] by
- Refs #1029. Specimen tube registration updated in the set of mutation …
- 11:23 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- (In [4729]) Refs #1029. MeLuDI updated by extending list of menu …
- 11:23 AM Changeset [4729] by
- Refs #1029. MeLuDI updated by extending list of menu options for …
- 10:41 AM Ticket #1031 (Define a genotype QC flag that can be set on alignments that has been ...) updated by
- (In [4728]) References #1031: Define a genotype QC flag that can be …
- 10:41 AM Changeset [4728] by
- References #1031: Define a genotype QC flag that can be set on …
- 9:18 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- (In [4727]) Refs #1029. MeLuDI updated in most wizards by specifying …
- 9:18 AM Changeset [4727] by
- Refs #1029. MeLuDI updated in most wizards by specifying that a …
Apr 3, 2018:
- 8:45 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- (In [4726]) Refs #1029. Referral generation updated in servlet by …
- 8:45 AM Changeset [4726] by
- Refs #1029. Referral generation updated in servlet by exchanging …
Mar 29, 2018:
- 1:39 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
-
(In [4725]) Refs #1029. MeLuDI updated by adding sites "
Halmstad
" … - 1:39 PM Changeset [4725] by
-
Refs #1029. MeLuDI updated by adding sites "
Halmstad
" and … - 1:13 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- (In [4724]) Refs #1029. Referral generation updated: i. The …
- 1:13 PM Changeset [4724] by
- Refs #1029. Referral generation updated: i. The MeLuDI main page …
- 1:09 PM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- Design update: * Referral generation should be updated: i. The …
- 11:29 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- (In [4723]) Refs #1029. MeLuDI updated in case/sample registration …
- 11:29 AM Changeset [4723] by
- Refs #1029. MeLuDI updated in case/sample registration wizards for …
- 11:27 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- Design update: * MeLuDI should be updated in case/sample …
- 10:38 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- (In [4722]) Refs #1029. MeLuDI updated with new configuration flag …
- 10:38 AM Changeset [4722] by
- Refs #1029. MeLuDI updated with new configuration flag …
- 10:04 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- Design update: * MeLuDI should be updated with new configuration flag …
- 8:16 AM Ticket #1034 (Remove expression matrix from release exporter) closed by
- fixed: (In [4721]) Fixes #1034: Remove expression matrix from release exporter
- 8:16 AM Changeset [4721] by
- Fixes #1034: Remove expression matrix from release exporter
Mar 28, 2018:
- 3:48 PM Ticket #1034 (Remove expression matrix from release exporter) created by
- The files are getting rather big and difficult to work with.
- 3:23 PM Ticket #1022 (INCA import/statistics wizards changes due to INCA 2.0) updated by
- (In [4720]) References #1022: INCA import/statistics wizards changes …
- 3:23 PM Changeset [4720] by
- References #1022: INCA import/statistics wizards changes due to INCA …
- 2:14 PM Ticket #1022 (INCA import/statistics wizards changes due to INCA 2.0) updated by
- (In [4719]) References #1022: INCA import/statistics wizards changes …
- 2:14 PM Changeset [4719] by
- References #1022: INCA import/statistics wizards changes due to INCA …
- 1:13 PM Ticket #1022 (INCA import/statistics wizards changes due to INCA 2.0) updated by
- (In [4718]) References #1022: INCA import/statistics wizards changes …
- 1:13 PM Changeset [4718] by
- References #1022: INCA import/statistics wizards changes due to INCA …
- 12:33 PM Ticket #1033 (The INCA export wizard should only export personal numbers) closed by
- fixed: (In [4717]) Fixes #1033: The INCA export wizard should only export …
- 12:33 PM Changeset [4717] by
- Fixes #1033: The INCA export wizard should only export personal …
Mar 27, 2018:
- 2:11 PM Ticket #1033 (The INCA export wizard should only export personal numbers) created by
- All other information in the file should be removed.
Mar 26, 2018:
- 9:37 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- Discussion regarding site prefix: * Currently the only MeLuDI …
- 9:14 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- (In [4716]) Refs #1029. MeLuDI updated with new configuration flag …
- 9:14 AM Changeset [4716] by
- Refs #1029. MeLuDI updated with new configuration flag …
- 9:12 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- Design update: MeLuDI should be updated with new configuration flag …
- 8:48 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
-
(In [4715]) Refs #1029. New directory
fonts/
added toMETA-INF/
… - 8:48 AM Changeset [4715] by
-
Refs #1029. New directory
fonts/
added toMETA-INF/
with OpenSans … - 8:44 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
-
(In [4714]) Refs #1029.
MANIFEST.MF
file inMETA-INF/
updated with … - 8:44 AM Changeset [4714] by
-
Refs #1029.
MANIFEST.MF
file inMETA-INF/
updated with new line …
Mar 22, 2018:
- 9:53 AM Ticket #1031 (Define a genotype QC flag that can be set on alignments that has been ...) updated by
- (In [4713]) References #1031: Define a genotype QC flag that can be …
- 9:53 AM Changeset [4713] by
- References #1031: Define a genotype QC flag that can be set on …
- 8:27 AM Ticket #1031 (Define a genotype QC flag that can be set on alignments that has been ...) updated by
- (In [4712]) References #1031: Define a genotype QC flag that can be …
- 8:27 AM Changeset [4712] by
- References #1031: Define a genotype QC flag that can be set on …
Mar 20, 2018:
- 12:46 PM Ticket #1031 (Define a genotype QC flag that can be set on alignments that has been ...) updated by
- (In [4711]) References #1031: Define a genotype QC flag that can be …
- 12:46 PM Changeset [4711] by
- References #1031: Define a genotype QC flag that can be set on …
- 12:39 PM net.sf.basedb.inca edited by
- Added 1.2-dev test release (diff)
- 8:58 AM Ticket #1031 (Define a genotype QC flag that can be set on alignments that has been ...) updated by
- (In [4710]) References #1031: Define a genotype QC flag that can be …
- 8:58 AM Changeset [4710] by
- References #1031: Define a genotype QC flag that can be set on …
- 8:45 AM Ticket #1031 (Define a genotype QC flag that can be set on alignments that has been ...) updated by
-
Status changed
- 8:34 AM Ticket #1021 (Add INCA 2.0 columns to the blacklist) updated by
- (In [4709]) References #1021: Add INCA 2.0 columns to the blacklist …
- 8:34 AM Changeset [4709] by
- References #1021: Add INCA 2.0 columns to the blacklist Added: * …
Mar 19, 2018:
- 1:41 PM Ticket #1024 (Create annotation type definitions for INCA 2.0) closed by
- fixed
- 1:40 PM Ticket #1024 (Create annotation type definitions for INCA 2.0) updated by
- See Reggie 4.16 update notes for …
- 1:38 PM net.sf.basedb.reggie/notes416 created by
- Added a note about INCA 2 changes
- 12:59 PM Ticket #1024 (Create annotation type definitions for INCA 2.0) updated by
- A file with all INCA 2 annotation type definitions has been uploaded …
- 12:53 PM Ticket #1022 (INCA import/statistics wizards changes due to INCA 2.0) updated by
- (In [4708]) References #1022: INCA import/statistics wizards changes …
- 12:53 PM Changeset [4708] by
- References #1022: INCA import/statistics wizards changes due to INCA …
- 11:25 AM Ticket #1022 (INCA import/statistics wizards changes due to INCA 2.0) updated by
- (In [4707]) References #1022: INCA import/statistics wizards changes …
- 11:25 AM Changeset [4707] by
- References #1022: INCA import/statistics wizards changes due to INCA …
- 9:49 AM Ticket #1029 (MeLuDI should be adapted to support the SCAN-B-rec project) updated by
- (In [4706]) Refs #1029. First import of code for referral generation, …
- 9:49 AM Changeset [4706] by
- Refs #1029. First import of code for referral generation, taken from …
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