Define a genotype QC flag that can be set on alignments that has been verified to match another sample
|Reported by:||Nicklas Nordborg||Owned by:||Nicklas Nordborg|
For example, we have matched the genotype of several alignments to the genotype of DNA extracted from blood. This gives a very good indication that the sample has not been contaminated or swapped during the processing in the lab. Other alignments have been matched against a secondary sample from the same person. It would be useful to know which those samples are since it could help us to identify problems with samples that don't match as expected.
We could for example create a new annotation for alignments
QC_GenoTypeVerified with possible values: