Merge on genesymbol

[Johan Enell]

Merge on genesymbol. Some reporters have a list of genesymbols separated with some char. Merge alla spots whose list contains one of the symbols specifyed by the user.

Parameters

• Annotationvalues, a list of values to merge on
• Separator, the separator of the genesymbols

Question What to do with overlapps? Print a waring an halt

[Johan Enell]

Parameters

• Annotation, what report annotion to merge on (*reporterId, genesymbol, locuslink...)
• Exlude, what annotion values should be ignored. Default null, NULL, "", empty, EMPTY, 0, -1

Default value on annotation value list should be a value so the user/plugin understand that it is not used.

[Johan Enell]

Choosing new reporterId: Identical match - choose one None identical match - choose reporter with most annotation information

[Johan Enell]

Present result

Flat file and index.html

column 1 : the matching string column 2 : nbr of matches column 3... : pos/rep [pos|rep]\t...

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[Jari Häkkinen]

Moved to ticket:81 due to spam.