Opened 18 years ago

Closed 16 years ago

#7 closed task (duplicate)

Merge on genesymbol

Reported by: Johan Enell Owned by: Johan Enell
Priority: major Milestone:
Component: onk.lu.se Keywords:
Cc:

Description (last modified by Johan Enell)

Merge on genesymbol. Some reporters have a list of genesymbols separated with some char. Merge alla spots whose list contains one of the symbols specifyed by the user.

Parameters

  • Annotationvalues, a list of values to merge on
  • Separator, the separator of the genesymbols

Question What to do with overlapps? Print a waring an halt

Change History (14)

comment:1 by Johan Enell, 18 years ago

Description: modified (diff)

Parameters

  • Annotation, what report annotion to merge on (*reporterId, genesymbol, locuslink...)
  • Exlude, what annotion values should be ignored. Default null, NULL, "", empty, EMPTY, 0, -1

Default value on annotation value list should be a value so the user/plugin understand that it is not used.

comment:2 by Johan Enell, 18 years ago

Choosing new reporterId: Identical match - choose one None identical match - choose reporter with most annotation information

comment:3 by Johan Enell, 18 years ago

Present result

Flat file and index.html

column 1 : the matching string column 2 : nbr of matches column 3... : pos/rep [pos|rep]\t...

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comment:13 by Jari Häkkinen, 16 years ago

Moved to ticket:81 due to spam.

comment:14 by Jari Häkkinen, 16 years ago

Resolution: duplicate
Status: newclosed
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