Opened 10 years ago

Last modified 10 years ago

#637 closed task

Add annotations for lot numbers in the DNA/RNA/FlowThrough registration — at Version 1

Reported by: Nicklas Nordborg Owned by: Nicklas Nordborg
Priority: major Milestone: Reggie v2.16
Component: net.sf.basedb.reggie Keywords:
Cc:

Description (last modified by Nicklas Nordborg)

We would like to keep track of the lot numbers for some reagents used in the lysis and extraction step.

Once a list of annotations has been defined the following changes should be made:

  • The lab protocol should include fields for writing down the lot numbers.
  • The second step of the "DNA/RNA/FlowThrough registration" should have input fields for the annotations.
  • In the last step it should be possible to set different values for some of the annotations per sample.

Lot numbers used in the lysis step are saved as annotations on the Lysate item. Lot numbers used in the extraction step are saved as annotation on the DNA, RNA and FlowThrough items.

List of annotations for lysate:

  • RLT Plus buffer -> RLT_plus
  • Beta-Mercaptoetanol -> BetaMerca
  • Reagent-DX -> !ReDX
  • QIAshredder column -> !Qiashredder

List of annotation for RNA/DNA/FlowThrough

  • AllPrep DNA/RNA Mini kit - AllprepMiniKit
  • ETOH 70% -> ETOH70
  • Buffer RW1 -> RW1
  • Buffer RPE -> RPE
  • Buffer AW1 -> AW1
  • Buffer AW2 -> AW2
  • Buffer EB -> EB
  • RNase free water -> RNaseFreeW
  • AllPrep DNA Mini Spin Column -> AllPrepDNA_col
  • RNeasy Mini Spin Column -> RNeasy_col

Change History (1)

comment:1 by Nicklas Nordborg, 10 years ago

Description: modified (diff)
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