Opened 2 years ago

Closed 2 years ago

#1422 closed enhancement (fixed)

Add default configuration options for the new Slurm cluster

Reported by: Nicklas Nordborg Owned by: Nicklas Nordborg
Priority: major Milestone: Reggie v4.41
Component: net.sf.basedb.reggie Keywords:
Cc:

Description

This should be usable now and we should enable it in Reggie so that we can start testing.

Change History (6)

comment:1 by Nicklas Nordborg, 2 years ago

In 6930:

References #1422: Add default configuration options for the new Slurm cluster

Added configuration for demux and FASTQ import.

comment:2 by Nicklas Nordborg, 2 years ago

In 6931:

References #1422: Add default configuration options for the new Slurm cluster

Added configuration for Hisat align.

comment:3 by Nicklas Nordborg, 2 years ago

In 6932:

References #1422: Add default configuration options for the new Slurm cluster

Added configuration for Stringtie.

comment:4 by Nicklas Nordborg, 2 years ago

In 6933:

References #1422: Add default configuration options for the new Slurm cluster

Added configuration for the legacy pipeline and the mBaf analysis.

comment:5 by Nicklas Nordborg, 2 years ago

In 6934:

References #1422: Add default configuration options for the new Slurm cluster

Added configuration for the variant calling and targeted genotyping.

comment:6 by Nicklas Nordborg, 2 years ago

Resolution: → fixed
Status: new → closed
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