Opened 5 years ago
Closed 5 years ago
#1027 closed defect (fixed)
External samples and Stratagene should not be part of genotyping qc
| Reported by: | Nicklas Nordborg | Owned by: | Nicklas Nordborg |
|---|---|---|---|
| Priority: | major | Milestone: | Reggie v4.16 |
| Component: | net.sf.basedb.reggie | Keywords: | |
| Cc: |
Description
The genotyping qc rely on being able to identify samples belonging to the same patient. We do not have this information for external samples (or Stratagene). This causes the genotype qc wizard to fail with a NullPointerException. The solution is to not include the samples in the qc wizard which can be accomplished by setting QC_GenoTypeStatus=Disabled. Reggie should be updated to do this automatically. In the meantime, this has to be done manually.
Change History (2)
comment:1 Changed 5 years ago by
| Status: | new → assigned |
|---|
comment:2 Changed 5 years ago by
| Resolution: | → fixed |
|---|---|
| Status: | assigned → closed |
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(In [4688]) Fixes #1027: External samples and Stratagene should not be part of genotyping qc