Opened 7 years ago

Last modified 7 years ago

#1017 closed enhancement

Remove code for handling optional MaskedSequences — at Version 1

Reported by: Nicklas Nordborg Owned by: Nicklas Nordborg
Priority: major Milestone: Reggie v4.16
Component: net.sf.basedb.reggie Keywords:
Cc:

Description (last modified by Nicklas Nordborg)

When the masking step has been introduced to the Hisat pipeline again (see #1015), all places in the code that works with MaskedSequences can be simplified since we no longer need to consider two different cases.

The "Delete unmasked Hisat alignments" wizard can also be removed.

Change History (1)

comment:1 by Nicklas Nordborg, 7 years ago

Description: modified (diff)
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