Opened 10 months ago

Closed 8 months ago

#1212 closed enhancement (fixed)

Enable filtering step for variant calling in auto-confirm mode

Reported by: Nicklas Nordborg Owned by: Nicklas Nordborg
Priority: minor Milestone: Reggie v4.25
Component: net.sf.basedb.reggie Keywords:
Cc:

Description

Auto-confirmation will currently start variant calling in raw-only mode. When the variant calling pipeline has been evaluated and seems to working as expected auto-confirmation should run the full variant calling pipeline including the filtering step.

Change History (2)

comment:1 Changed 8 months ago by Nicklas Nordborg

Milestone: Reggie v4.xReggie v4.25
Status: newaccepted

comment:2 Changed 8 months ago by Nicklas Nordborg

Resolution: fixed
Status: acceptedclosed

In 5818:

Fixes #1212: Enable filtering step for variant calling in auto-confirm mode

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