Timeline


and

Jan 22, 2019: Today

3:50 PM Changeset [5260] by nicklas
References #1104: Re-factor the INCA import Mapping columns to …
2:24 PM Changeset [5259] by olle
Refs #1029. Case summary updated in Case section by displaying "FFPE …
9:51 AM Changeset [5258] by nicklas
References #1104: Re-factor the INCA import Updated parsing of …

Jan 21, 2019: Yesterday

4:03 PM Changeset [5257] by olle
Refs #1029. FFPE block registration updated to display personal number …
3:10 PM Changeset [5256] by nicklas
References #1104: Re-factor the INCA import Updated the initial …
1:46 PM Changeset [5255] by olle
Refs #1029. Sample report servlet updated to support the new naming …
1:37 PM Changeset [5254] by olle
Refs #1029. Convenience method `String fetchSpecimenItemPrefix(int …
1:34 PM Changeset [5253] by olle
Refs #1029. New convenience method `String fetchSpecimenItemPrefix(int …
1:25 PM Ticket #1104 (Re-factor the INCA import) created by nicklas
We want to add more information to the output files generated by the …
8:41 AM Ticket #1103 (Add permission check for downloading INCA report files) closed by nicklas
fixed: (In [5252]) Fixes #1103: Add permission check for downloading INCA …
8:41 AM Changeset [5252] by nicklas
Fixes #1103: Add permission check for downloading INCA report files …
8:38 AM Ticket #1103 (Add permission check for downloading INCA report files) created by nicklas
The INCA import and statistics wizards create a number of report …

Jan 18, 2019:

1:54 PM Changeset [5251] by olle
Refs #1029. Java class path file updated for new jre version …
12:51 PM Ticket #1095 (Implement "update" mode for the release importer) closed by nicklas
fixed
12:51 PM Ticket #1098 (Release exporter should generate scripts that works with the "update" ...) closed by nicklas
fixed
12:45 PM Ticket #1102 (The level3 exporter should use script templates) closed by nicklas
fixed: (In [5250]) Fixes #1102: The level3 exporter should use script templates
12:45 PM Changeset [5250] by nicklas
Fixes #1102: The level3 exporter should use script templates
11:22 AM Changeset [5249] by olle
Refs #1029. Case summary updated in Case section by adding row for …
11:03 AM Changeset [5248] by nicklas
References #1098: Release exporter should generate scripts that works …
10:59 AM Ticket #1102 (The level3 exporter should use script templates) created by nicklas
The changes made in #1098 in Reggie changes the script generation to …
10:55 AM Changeset [5247] by nicklas
References #1095: Implement "update" mode for the release importer …
10:41 AM Changeset [5246] by nicklas
References #1099: The cohort exporter should have support for …
9:33 AM Changeset [5245] by nicklas
References #1090: Introduce FirstReleasedIn? annotation The …
9:22 AM Changeset [5244] by nicklas
References #1099: The cohort exporter should have support for …

Jan 17, 2019:

1:28 PM Changeset [5243] by olle
Refs #1029. Approving a created FFPE block order form now stored the …
12:47 PM Changeset [5242] by nicklas
References #1095: Implement "update" mode for the release importer …
12:42 PM net.sf.basedb.reggie/notes421 edited by nicklas
(diff)
12:40 PM net.sf.basedb.reggie edited by nicklas
Typo (diff)
11:41 AM net.sf.basedb.relax/notes14 edited by nicklas
Added update note for Relax 1.4 related to the FirstReleasedIn? annotation (diff)
11:26 AM net.sf.basedb.relax/notes14 edited by nicklas
Added update note for Relax 1.4 related to Cufflinks and StringTie? … (diff)
11:08 AM Changeset [5241] by nicklas
References #1099: The cohort exporter should have support for …
11:06 AM Changeset [5240] by nicklas
References #1072: Introduce Lysate item between RNA and Specimen …
9:07 AM net.sf.basedb.relax/notes14 created by nicklas
Added updated notes for Relax 1.4
8:35 AM Changeset [5239] by nicklas
References #1090: Introduce FirstReleasedIn? annotation The cohort …
7:43 AM Changeset [5238] by nicklas
References #1099: The cohort exporter should have support for …

Jan 16, 2019:

4:48 PM Changeset [5237] by olle
Refs #1029. FFPE block registration wizard updated to use input from a …
2:28 PM Changeset [5236] by nicklas
References #1095: Implement "update" mode for the release importer …
12:30 PM Changeset [5235] by olle
Refs #1029. Counter for number of FFPE blocks unused for section …
8:44 AM Changeset [5234] by nicklas
References #1075: Change the release exporter to work with list of …

Jan 15, 2019:

10:42 AM Changeset [5233] by olle
Refs #1029. Updates due to version number change to "1.6.0-dev". …
10:31 AM Changeset [5232] by olle
Refs #1029. Updates due to version number change to "1.6.0b3". 1. …
9:36 AM Changeset [5231] by nicklas
References #1075: Change the release exporter to work with list of …
8:57 AM Ticket #1074 (Add more subtypes) closed by nicklas
fixed
8:44 AM Ticket #1101 (Annotation type categories for raw data types) closed by nicklas
fixed: (In [5230]) Fixes #1101: Annotation type categories for raw data types
8:44 AM Changeset [5230] by nicklas
Fixes #1101: Annotation type categories for raw data types
8:42 AM Ticket #1101 (Annotation type categories for raw data types) created by nicklas
BASE has added support for using the raw data type of a raw bioassay …

Jan 14, 2019:

1:18 PM Changeset [5229] by nicklas
References #1099: The cohort exporter should have support for …
11:51 AM Changeset [5228] by nicklas
References #1099: The cohort exporter should have support for …
11:46 AM Changeset [5227] by nicklas
References #1099: The cohort exporter should have support for …
9:50 AM Ticket #1100 (The release exporter should set subtype on raw bioassay annotations) closed by nicklas
fixed: (In [5226]) Fixes #1100: The release exporter should set subtype on …
9:50 AM Changeset [5226] by nicklas
Fixes #1100: The release exporter should set subtype on raw bioassay …
9:27 AM Changeset [5225] by olle
Refs #1029. Lab tracking protocol for FFPE extraction wizard problems …
9:20 AM Ticket #1100 (The release exporter should set subtype on raw bioassay annotations) created by nicklas
Without this information the relax server will not be able to specify …

Jan 11, 2019:

4:09 PM Changeset [5224] by olle
Refs #1029. Updates due to version number change to "1.6.0-dev". …
2:26 PM Changeset [5223] by nicklas
References #1099: The cohort exporter should have support for …
2:22 PM Changeset [5222] by nicklas
References #1099: The cohort exporter should have support for …
11:55 AM Changeset [5221] by nicklas
References #1099: The cohort exporter should have support for …
10:46 AM Changeset [5220] by nicklas
References #1099: The cohort exporter should have support for …
9:06 AM Changeset [5219] by nicklas
References #1099: The cohort exporter should have support for …
8:22 AM Ticket #1099 (The cohort exporter should have support for exporting downstream items) created by nicklas
The cohort exporter (see #987) currently takes an item list and export …

Jan 10, 2019:

8:41 AM Changeset [5218] by nicklas
References #1081: The release exporter should export more data Added …

Jan 9, 2019:

3:03 PM Changeset [5217] by olle
Refs #1029. Updates due to version number change to "1.6.0b2". 1. …
2:57 PM Changeset [5216] by olle
Refs #1029. Convenience method `boolean itemIsMeludiItem(String …
2:48 PM Changeset [5215] by olle
Refs #1029. FFPE section order form generation updated to use a name …
2:23 PM Changeset [5214] by olle
Refs #1029. FFPE section (specimen) registration updated to not set a …
2:11 PM Changeset [5213] by olle
Refs #1029. FFPE block order form and FFPE section order form wizards …
8:13 AM Changeset [5212] by olle
Refs #1029. Referral form generation updated to not include patient …

Jan 8, 2019:

4:12 PM Changeset [5211] by nicklas
References #1081: The release exporter should export more data Added …
4:09 PM net.sf.basedb.yubikey edited by jari
(diff)
9:54 AM Changeset [5210] by nicklas
Preparing for future release Yubikey extension 1.6
9:53 AM Milestone YubiKey v1.5 completed
See YubiKey authentication extension for …
9:52 AM PluginDownload edited by nicklas
Released Yubikey extension 1.5 (diff)
9:52 AM net.sf.basedb.yubikey edited by nicklas
(diff)
9:51 AM net.sf.basedb.yubikey edited by nicklas
Released Yubikey extension 1.5 (diff)
9:50 AM yubikey-1.5.tar.gz attached to net.sf.basedb.yubikey by nicklas
YubiKey? 1.5
9:48 AM Changeset [5209] by nicklas
Tagging Yubikey extension 1.5
9:47 AM Changeset [5208] by nicklas
Preparing to release Yubikey extension 1.5
9:40 AM Changeset [5207] by nicklas
Preparing for future release OTP extension 1.3
9:39 AM Milestone OTP login v1.2 completed
See OTP login extension for more information.
9:38 AM PluginDownload edited by nicklas
Released OTP login extension 1.2 (diff)
9:37 AM net.sf.basedb.otp edited by nicklas
Released OTP login extension 1.2 (diff)
9:35 AM base-otp-1.2.tar.gz attached to net.sf.basedb.otp by nicklas
OTP login 1.2
9:33 AM Changeset [5206] by nicklas
Tagging OTP extension 1.2
9:32 AM Changeset [5205] by nicklas
Preparing to release OTP extension 1.2
8:59 AM Changeset [5204] by olle
Refs #1029. FFPE block order form generation updated to use a name of …

Jan 7, 2019:

4:23 PM Changeset [5203] by olle
Refs #1029. Registration wizard for FFPE blocks updated with "Today" …
4:00 PM Changeset [5202] by olle
Refs #1029. Referral form generation updated to no longer add a blank …
10:06 AM Changeset [5201] by olle
Refs #1029. Referral form generation updated to exchange initial …
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