popLowess is a method to normalize array-CGH data described in

Normalization of array-CGH data: influence of copy number imbalances
J. Staaf, G. Jönsson, M. Ringnér and J. Vallon-Christersson
BMC Genomics 8:382 (2007)
Abstract PDF


The popLowess software is available as a stand-alone software package, or as a plug-in to BASE, under the GNU General Public License.

Download popLowess

Download the latest BASE plugin release (popLowess-1.0).
Download the latest stand-alone release (popLowess-1.0.2).
Previous versions can be in the Attachments section below.


  • The handling of data sets with no missing values has thanks to feedback from Wen Fong been improved in stand-alone popLowess in version 1.0.2.


If you have suggestions, comments or bug reports, please send an email to johan.staaf .., at ,..

Last modified 10 years ago Last modified on Aug 20, 2013, 2:52:19 PM

Attachments (3)

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