Changes between Initial Version and Version 1 of net.sf.basedb.varsearch/install


Ignore:
Timestamp:
Jun 11, 2021, 8:34:11 AM (18 months ago)
Author:
Nicklas Nordborg
Comment:

Started to write installation instructions for the Variant Search extension.

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  • net.sf.basedb.varsearch/install

    v1 v1  
     1= Installing the Variant Search extension =
     2
     3== Installation and updating ==
     4
     5 1. Download the latest `varsearch-x.y.tar.gz` file from the [wiki:net.sf.basedb.varsearch Variant Search main page].
     6 2. Unpack the downloaded file to a directory of your choice.
     7 3. Copy the `varsearch.jar` file to your BASE plug-ins directory. Look in your
     8    `base.config` file if you don't know where this is. There are not other
     9    configuration files.
     10 4. Log in to BASE as an administrator and go to the '''Administrate->Plug-ins & Extensions->Overview''' page.
     11 5. Run the installation wizard and select to install `varsearch.jar`.
     12 6. Refresh your menu entries with '''BASE -> Reload permissions'''
     13 7. Go to the '''Extensions -> Variant Search (admin)''' menu and then continue to the '''Installation wizard'''. It should display some warnings and error messages. Click on the `Create missing items` button to fix them.
     14 8. The installation is now complete, but before we can start searching the VCF files need to be indexed.
     15