Changes between Initial Version and Version 1 of net.sf.basedb.relax/notes14


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Timestamp:
Jan 17, 2019, 9:07:00 AM (5 years ago)
Author:
Nicklas Nordborg
Comment:

Added updated notes for Relax 1.4

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  • net.sf.basedb.relax/notes14

    v1 v1  
     1= Updating to Relax 1.4 =
     2
     3The following steps should be done after installing Relax 1.4
     4
     5=== Create Lysate items between RNA and Specimen ===
     6
     7The data model has been updated with a `Lysate` item type that sits between the `Specimen` and `RNA` items in the old model (see #1072). `Lysate` items need to be created and properly linked with the existing `Specimen` and `RNA` items. Some annotations also need to be moved from the existing `RNA` items to the `Lysate` items.
     8
     9The '''Relax installation wizard''' contains a function for doing this. When you enter the installation wizard it will most likely complain about some missing subtypes and annotation type, etc. After fixing this the installation wizard should display a note about the number of `RNA` items that are linked to `Specimen` items and a button '''Create Lysate and re-link RNA'''. Click on this button and wait for the installation wizard to finish. It will take some time for it to finish but it will save the results at regular intervals so if there is a problem it should be possible to re-start and try again.