Changes between Version 29 and Version 30 of net.sf.basedb.illumina


Ignore:
Timestamp:
Apr 20, 2010, 8:17:22 AM (15 years ago)
Author:
Nicklas Nordborg
Comment:

Releasing Illumina plug-ins 1.5

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  • net.sf.basedb.illumina

    v29 v30  
    11= Illumina plug-ins package for BASE =
    22
    3 This package contains plug-ins for the Illumina platform. The plug-ins require BASE 2.12.0 or later
     3This package contains plug-ins for the Illumina platform. The plug-ins require BASE 2.15.0 or later
    44and that you have data in the form of either:
    55
    … …  
    2222= Documentation =
    2323
    24 [source:/plugins/base2/net.sf.basedb.illumina/tags/1.4/INSTALL INSTALL] describes how to install the plug-in package. It is important that you read this document. The plug-ins require additional raw data tables and reporter annotation columns in the database before they can be used.
     24[source:/plugins/base2/net.sf.basedb.illumina/tags/1.5/INSTALL INSTALL] describes how to install the plug-in package. It is important that you read this document. The plug-ins require additional raw data tables and reporter annotation columns in the database before they can be used.
    2525
    26 [source:/plugins/base2/net.sf.basedb.illumina/tags/1.4/README README] contains general information about the plug-ins and specific information for expressions experiments.
     26[source:/plugins/base2/net.sf.basedb.illumina/tags/1.5/README README] contains general information about the plug-ins and specific information for expressions experiments.
    2727
    28 [source:/plugins/base2/net.sf.basedb.illumina/tags/1.4/README_PluginDetails README_PluginDetails] contains detailed information on some of the plug-ins provided by this package.
     28[source:/plugins/base2/net.sf.basedb.illumina/tags/1.5/README_PluginDetails README_PluginDetails] contains detailed information on some of the plug-ins provided by this package.
    2929
    30 [source:/plugins/base2/net.sf.basedb.illumina/tags/1.4/README_SNP README_SNP] contains specific information for SNP experiments.
     30[source:/plugins/base2/net.sf.basedb.illumina/tags/1.5/README_SNP README_SNP] contains specific information for SNP experiments.
    3131
    32 [source:/plugins/base2/net.sf.basedb.illumina/tags/1.4/contrib/README_beadstudio2ibs.txt README_beadstudio2ibs.txt] contains information on how to convert Illumina !BeadStudio expression projects to a format usable with this package.
     32[source:/plugins/base2/net.sf.basedb.illumina/tags/1.5/contrib/README_beadstudio2ibs.txt README_beadstudio2ibs.txt] contains information on how to convert Illumina !BeadStudio expression projects to a format usable with this package.
    3333
    3434
    … …  
    4141
    4242|| Version || Revision || Date           || Binary (tar.gz) || BASE Version || ||
     43|| 1.5     || 1222     || April 20, 2010 || [attachment:wiki:net.sf.basedb.illumina:illumina-plugins-1.5.tar.gz?format=raw illumina-plugins-1.5.tar.gz] (129kB) || 2.15.0 or later  || [query:"status=closed&group=resolution&milestone=Illumina package v1.5&order=priority" changelog] ||
    4344|| 1.4     || 1173     || Sep 29, 2009 || [attachment:wiki:net.sf.basedb.illumina:illumina-plugins-1.4.tar.gz?format=raw illumina-plugins-1.4.tar.gz] (124kB) || 2.12.0 or later  || [query:"status=closed&group=resolution&milestone=Illumina package v1.4&order=priority" changelog] ||
    4445|| 1.3     || 969      || Feb 25, 2009 || [attachment:wiki:net.sf.basedb.illumina:illumina-plugins-1.3.tar.gz?format=raw illumina-plugins-1.3.tar.gz] (102kB) || 2.9.0 or later || [query:"status=closed&group=resolution&milestone=Illumina package v1.3&order=priority" changelog] ||
    … …  
    4748|| 1.0     || 632      || March 13, 2008 || [attachment:wiki:net.sf.basedb.illumina:illumina-plugins-1.0.tar.gz?format=raw illumina-plugins-1.0.tar.gz] (80kB) || 2.6.0 or later || [query:"status=closed&group=resolution&milestone=Illumina package v1.0&order=priority" changelog] ||
    4849
    49 Source code can be downloaded from the subversion repository. Use the following command to get source code for the 1.4 version:
     50Source code can be downloaded from the subversion repository. Use the following command to get source code for the 1.5 version:
    5051
    51  `svn co http://baseplugins.thep.lu.se/svn/plugins/base2/net.sf.basedb.illumina/tags/1.4 illumina-1.4`
     52 `svn co http://baseplugins.thep.lu.se/svn/plugins/base2/net.sf.basedb.illumina/tags/1.5 illumina-1.5`
    5253
    5354