Opened 15 years ago
Closed 15 years ago
#93 closed task (fixed)
Illumina SNP validator and meta-data extractor
Reported by: | Martin Svensson | Owned by: | Martin Svensson |
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Priority: | critical | Milestone: | Illumina package v1.0 |
Component: | net.sf.basedb.illumina | Keywords: | |
Cc: |
Description
The data files should be validated automatically and some data such as number of spot should be extracted for display in the GUI.
Change History (10)
comment:1 Changed 15 years ago by
Milestone: | → Illumina package v1.0 |
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comment:2 Changed 15 years ago by
Milestone: | Illumina package v1.0 |
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comment:3 Changed 15 years ago by
Milestone: | → Illumina package v1.x |
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comment:4 Changed 15 years ago by
comment:5 Changed 15 years ago by
Priority: | major → critical |
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comment:6 Changed 15 years ago by
Milestone: | Illumina package v1.x → Illumina package v1.0 |
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comment:7 Changed 15 years ago by
Owner: | changed from Johan Enell to Martin Svensson |
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Status: | new → assigned |
comment:8 Changed 15 years ago by
comment:9 Changed 15 years ago by
comment:10 Changed 15 years ago by
Resolution: | → fixed |
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Status: | assigned → closed |
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This is for the array design. A BPM file is opened by BeadStudio? and then saved in csv format. The start of that file looks like:
The "SNP Count" value can be extracted and stored in the array design. No features are imported into the database.