Create array design from a bgx-file
|Reported by:||Nicklas Nordborg||Owned by:||Martin Svensson|
|Priority:||critical||Milestone:||Illumina package v1.0|
Description (last modified by )
A bgx file contains array design information for Illumina arrays. The file is a gzip-compressed text file. The file also contains reporter annotations. The information we have so far is:
- The Probe_Id column should be used as the reporter id.
- The Array_Address_Id column is the Feature ID. This is the ID that is present in the raw data files. Thus, the array designs must use the FEATURE_ID as the feature identification method.
NOTE! The bgx file has two sections: [Probes] and [Controls]. Data from both sections should be imported.
Import of Reporter annotations is in a separate ticket see ticket#94