Partial confirmation of demux job
|Reported by:||Nicklas Nordborg||Owned by:||Nicklas Nordborg|
The auto-confirm functionality for demux jobs have some rules that are for the entire demux and some rules that are for individual libraries (see #717).
The rule about no
DemuxWarnings should still stop the entire sequencing run.
The rules about number of reads and fragment size should only stop the libraries that not fulfill them.
The simple solution is to simply not start the alignment stop for those libraries. The drawback is that it will not be possible to see the information from the "Confirm demux" wizard since the libraries will be waiting in the "Start alignment" wizard.
It would be better to add support for some kind of "partial confirmation". The sequencing run should still be visible in the "Confirm demux" and it should display the same information as before, except that libraries that passed the partial confirmation should not have the options to flag or start alignment.