Opened 12 years ago

Closed 12 years ago

#403 closed defect (fixed)

NullPointerException when using the TDMS exporter

Reported by: Nicklas Nordborg Owned by: Nicklas Nordborg
Priority: major Milestone: MeV Launcher 1.10
Component: net.sf.basedb.mev Keywords:


From the mailing list:

Running base v3.1.1 with mev-launcher-1.9 binary (current base version and MeV version 4.7.3) on Centos6. Tried to export a bioassay set of two bioassays to a TDMS file for analysis in MeV and got a unnamed error with the following stack trace:

  at net.sf.basedb.mev.export.TdmsExporter.addReporterFields(
  at net.sf.basedb.mev.export.TdmsExporter.beginExport(
  at net.sf.basedb.util.export.spotdata.AbstractBioAssaySetExporter.doExport(
  at net.sf.basedb.mev.plugin.TdmsExporterPlugin.performExport(
  at net.sf.basedb.core.PluginExecutionRequest.invoke(
  at net.sf.basedb.core.InternalJobQueue$

The workaround is to use the 'clone reporters' function for the experiment to create a cloned set of reporter annotations.

Change History (1)

comment:1 by Nicklas Nordborg, 12 years ago

Resolution: fixed
Status: newclosed

(In [1700]) Fixes #403: NullPointerException when using the TDMS exporter

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