Opened 14 years ago
Closed 14 years ago
#171 closed enhancement (fixed)
IBS raw data importer should be able to handle floats in some columns
Reported by: | Jari Häkkinen | Owned by: | Martin Svensson |
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Priority: | major | Milestone: | Illumina package v1.3 |
Component: | net.sf.basedb.illumina | Keywords: | |
Cc: |
Description
There are four columns in IBS files: Illumicode,N,Mean GRN,Dev GRN
The current importer implementation requires that the Mean GRN and Dev GRN columns are integers. The reason for this is that data generated by the Illumina scanner generates integers in these columns. However, if the IBS files comes from other sources then the mean and dev columns may be floats. I think we should support floats in these columns and the proposed change will not break the current functionality.
I have attached a sample file.
Attachments (1)
Change History (3)
Changed 14 years ago by
Attachment: | IlluminaFloat.data added |
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comment:1 Changed 14 years ago by
Owner: | changed from Nicklas Nordborg to Martin Svensson |
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Status: | new → assigned |
comment:2 Changed 14 years ago by
Resolution: | → fixed |
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Status: | assigned → closed |
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(In [943]) Fixes #171 IBS raw data importer should be able to handle floats in some columns