Export RMA bioassayset as a tab delimited file

[keching@…]

Be able to dump out (export) the RMA bioassayset as a tab delimited file. Currently I can see one probe at a time. I'm trying to write a sql query on the mysql command line to join the proper tables, but i'm still figuring out the schema.

[keching@…]

i come up with something like this:

select r.name, b.name, s.column,s.position, s.ch1 from BioAssays as b, DataCubeColumns as c, base2dynamic.D2Spot as s, base2dynamic.D2Pos as p, Reporters as r where b.datacubecolumn_id=c.id and c.column_no = s.column and c.datacube_id=2 and p.position=s.position and p.cube=s.cube and r.id=p.reporter_id and s.cube=2 order by s.position, s.column limit 20;

[Jari Häkkinen]

This ticket belongs in BASE as it is a core plugin. The issue is reported as ​http://base.thep.lu.se/ticket/361.

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[Jari Häkkinen]

The export is implemented as a core plugin and is available in BASE 2.1.1 and later.