Opened 3 months ago
Closed 3 months ago
#1615 closed enhancement (fixed)
Implement SBS96 for RNAseq variant calling
Reported by: | Nicklas Nordborg | Owned by: | Nicklas Nordborg |
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Priority: | major | Milestone: | Reggie v5.3.1 |
Component: | net.sf.basedb.reggie | Keywords: | |
Cc: |
Description
The same python script that is used in the WGS variant calling pipeline should probably work with some minor modifications (eg. there is no normal sample in the VCF).
The container need to be updated and include the SigProfilerPlotting package.
Change History (4)
comment:1 by , 3 months ago
comment:4 by , 3 months ago
Resolution: | → fixed |
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Status: | new → closed |
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