Opened 2 months ago

Closed 2 months ago

#1611 closed defect (fixed)

All Stringtie/2023 gene expression bioassays are missing an array design since Reggie 5.0

Reported by: Nicklas Nordborg Owned by: Nicklas Nordborg
Priority: major Milestone: Reggie v5.2
Component: net.sf.basedb.reggie Keywords:
Cc:

Description

It seems like there is a bug in the changes made when converting raw bioassay items to derived bioassays. See #1581.

Most likely the auto-confirm functionality is not picking up the configured array design for the RNAseq/StringTie/2023 pipeline.

Existing items need to be fixed manually with a batch importer.

Change History (1)

comment:1 by Nicklas Nordborg, 2 months ago

Resolution: → fixed
Status: new → closed

In 7840:

Fixes #1611: All Stringtie/2023 gene expression bioassays are missing an array design since Reggie 5.0

Filtering was made on the incorrect pipeline value (RNAseq/Hisat/2023).

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