Opened 7 months ago
Closed 7 months ago
#1589 closed enhancement (fixed)
Add support for haploid genotypes
Reported by: | Nicklas Nordborg | Owned by: | Nicklas Nordborg |
---|---|---|---|
Priority: | major | Milestone: | Variant Search v1.11 |
Component: | net.sf.basedb.varsearch | Keywords: | |
Cc: |
Description
We are updating the genotypes from the OncoArray dataset so that regions in chrX and chrY that are hoploid (depending on gender) are coded as 0, 1 or . instead of 0/0, 1/1 and ./.
The current indexing and search functionality will probably have some problems with them.
Change History (4)
comment:1 by , 7 months ago
comment:4 by , 7 months ago
Resolution: | → fixed |
---|---|
Status: | new → closed |
Note:
See TracTickets
for help on using tickets.
In 7684: