Methylation beta-analysis wizard
|Reported by:||Nicklas Nordborg||Owned by:||Nicklas Nordborg|
Implement a wizard that calculate beta-values for methylation bioassays.
See ticket #1418 for information about importing information about the methylation processing and items. Since it is likely that we may do more of this type of analysis in the future it was decided that the actual analysis that create beta-values should be implemented as a wizard. The wizard should assume that DNA aliquots, BeadChip information and Methylation items have been imported as outlined in #1418.
The wizard will then start jobs on the new (container-based) cluster for running the Minfi pipeline that create beta-values, some PDF plots and other statistics for each sample.