Opened 5 months ago

#1393 new task

Release exporter changes due to Oncoarray data

Reported by: Nicklas Nordborg Owned by: Nicklas Nordborg
Priority: major Milestone: Reggie v4.x
Component: net.sf.basedb.reggie Keywords:


In ticket #1346, we added data from Oncoarray SNP chips to lorry. A new item chain from BloodDNA was created: BloodDNA -> BeadChip -> Scan -> GenotypeCall -> OncoArray500K.

The current release exporter stops at the topmost BloodDNA level. In the database there are typically 3 levels with BloodDNA before the BeadChip level.

We need to decide which data that should be included in releases and how to represent the item chain in a more condensed way.

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