Updates to registration of specimen handled by external lab
Description (last modified by )
See #1295 for background.
R2sizeentries in the
fastqsection that can be used to verify that the complete FASTQ files have been transfered.
Library/Plate wellentry is now specifying coordinates using
A:1format. Update It was not just a formatting issue. The 'A:1' format is used when the library prep is made on 8x12 plates and the '1:1' format is used when the library prep is made on 1x8 strips. The plate format is going to be used in the normal workflow, but there may be situations when the strip format is used instead. We should model this and introduce a "LibStrip" plate type with 1x8 geometry. We can use the format of the
Library/Plate wellvalue to decide which plate type to use.
- New value in
TruSeq Stranded mRNA - Expression - Breast. The
ExternalRefannotation for the corresponding library protocol need to be updated manually in lorry.
Change History (14)
Note: See TracTickets for help on using tickets.