Convert SSP score annotations to TEXT type

[Nicklas Nordborg]

It is the same problem as in #1238. The SSP_*_Scores annotations should be defined as TEXT type. Existing SSP annotations need to be removed, and the SSP plug-in re-executed.

The update process involves some manual steps:

1. Export a file with the ID of all StringTie raw bioassays that already have one or more SSP annotaions. No other columns are needed. The Excel format can be used. Save to exported file to the local computer.
2. Add headers to the exported file for all SSP annotation types:

   SSP_CC15
   SSP_CC15_Scores
   SSP_ER
   SSP_ER_Scores
   SSP_ERBB2
   SSP_ERBB2_ERn
   SSP_ERBB2_ERn_Scores
   SSP_ERBB2_ERp
   SSP_ERBB2_ERp_Scores
   SSP_ERBB2_Scores
   SSP_IntClust10
   SSP_IntClust10_Scores
   SSP_Ki67
   SSP_Ki67_Scores
   SSP_NHG
   SSP_NHG_Scores
   SSP_PAM50subtype
   SSP_PAM50subtype_Scores
   SSP_PR
   SSP_PR_Scores
   SSP_RORasT0
   SSP_RORasT0_Scores
   SSP_Subtype
   SSP_Subtype_Scores
   

Use the attachment:headers-for-import.txt​ file as template.

3. Upload the file to BASE and run the Annotation importer plug-in. Make sure that Identification method=Internal ID, that all columns are mapped correctly and that the Remove existing option is enabled in the third step.
4. When all annotations have been deleted it should be possible to delete all SSP_* annotation types as well. Do not forget to empty the trashcan.
5. Update Reggie and run the Installation wizard. The SSP annotation types should be re-created.
6. All existing StringTie raw bioassays need to be re-analyzed by the SSP plug-in.

[Nicklas Nordborg]

In 5963:

References #1252: Convert SSP score annotations to TEXT type

Annotation types for SSP scores are now created with the TEXT type.