Finalize the "Confirm MIPs demux" wizard

[Nicklas Nordborg]

This wizard is full with TODO that are mostly related to not knowing anything about the next step. The next step is "Alignment" (see #1218) so it should now be possible to finalize the "Confirm demux" wizard. We can prepare an item list for the MIPs alignment and add items to it.

[Nicklas Nordborg]

In 5787:

References #1216: Finalize the "Confirm MIPs demux" wizard

Added the "MIPs alignment pipeline" item list.

[Nicklas Nordborg]

In 5788:

Fixes #1216: Finalize the "Confirm MIPs demux" wizard

The wizard now display "Align" as the next step and also put selected items into the "MIPs Alignment Pipeline" list.

[Nicklas Nordborg]

I think we should add columns with Libplate+location and Barcode information to the table.

[Nicklas Nordborg]

In 5797:

References #1216: Finalize the "Confirm MIPs demux" wizard

Added some more columns: Plate, Barcode and MIPS_Panel. Also changed the sort order to sort by plate location.

[Nicklas Nordborg]

In 5800:

References #1216: Finalize the "Confirm MIPs demux" wizard

Metrics file is split into individual files if demuxing multiple sequencing runs together.

[Nicklas Nordborg]

In 5802:

References #1216: Finalize the "Confirm MIPs demux" wizard

Number of reads is formatted dynamically instead of in "thousands". This is due to the range of values is big and it was confusing to see and understand values such as '1234', '25.2' and '0.45' and compare them quickly. Now they will be displayed as '1.2M', '25.2k' and '450' instead.

[Nicklas Nordborg]

In 5804:

References #1216: Finalize the "Confirm MIPs demux" wizard

The MIPs demux should not generate any warnings related to the number of reads since it is better if the pipeline runs to completion before checking quality and results.

[Nicklas Nordborg]

In 5808:

References #1216: Finalize the "Confirm MIPs demux" wizard

The read string construction seems to work as expected.