Opened 6 years ago
Last modified 6 years ago
#1028 closed enhancement
Add support for StringTie data — at Version 1
| Reported by: | Nicklas Nordborg | Owned by: | |
|---|---|---|---|
| Priority: | major | Milestone: | Relax v1.2 |
| Component: | net.sf.basedb.relax | Keywords: | |
| Cc: |
Description (last modified by )
The relax server is currently only supporting "cufflinks" raw bioassays. We need to define the "stringtie" type in the same way as we do on the production server.
Once the raw data type has been defined, the release importer should probably work without (or with only minor) modifications.
The level 3 exporter plug-in currently has a section for handling Cufflinks and FPKM files. This need to the modified to support StringTie as well (and whatever file(s) we decide publish).
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