Opened 7 years ago

Closed 7 years ago

Last modified 7 years ago

#488 closed enhancement (fixed)

Add support for matching RNAQC items using location instead of names from the Caliper Well Table file

Reported by: Nicklas Nordborg Owned by: Nicklas Nordborg
Priority: minor Milestone: Reggie v2.12
Component: net.sf.basedb.reggie Keywords:
Cc:

Description

For some reason it seems like the Caliper software on occasion is forgetting the sample names for a few locations. Instead of the sample name, the location coordinate is found. As long as this only happens for a few samples, it should be safe to assume that the correct file is used. See also [1963] for a similar issue with the Caliper files for the Library preparation.

Change History (3)

comment:1 Changed 7 years ago by Nicklas Nordborg

Status: newassigned

comment:2 Changed 7 years ago by Nicklas Nordborg

Resolution: fixed
Status: assignedclosed

(In [1966]) Fixes #488: Add support for matching RNAQC items using location instead of names from the Caliper Well Table file

A side effect is that a simple change (using the doImport method instead of preValidate) made it possible to display all warnings immediately.

comment:3 Changed 7 years ago by Nicklas Nordborg

(In [1967]) Fixes #488: Add support for matching RNAQC items using location instead of names from the Caliper Well Table file

Test data.

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