Opened 9 years ago

Closed 9 years ago

#117 closed task (fixed)

Create average nomralization plug-in

Reported by: jari Owned by: martin
Priority: major Milestone: Normalization package v1.0
Component: net.sf.basedb.normalizers Keywords:
Cc:

Description


Change History (10)

comment:1 Changed 9 years ago by martin

(In [729]) References #117 Almost done with implementing the normalization algorithm for this plugin

comment:2 Changed 9 years ago by martin

(In [730]) References #117 Average normalization plug-in is almost done. The plug-in cannot handle two-channel data, the implementation needs to be verified and tested.

comment:3 Changed 9 years ago by martin

  • Milestone changed from ZZ Other tickets to Normalization package

comment:4 Changed 9 years ago by martin

  • Component changed from net.sf.basedb.examples.extensions to net.sf.basedb.normalizations

comment:5 Changed 9 years ago by martin

  • Status changed from new to assigned

comment:6 Changed 9 years ago by martin

(In [742]) References #117 Cleaned up and refactored the classes. The Avg.norm. plug-in does not yet do any normalization.

comment:7 Changed 9 years ago by martin

(In [743]) References #117 The normalization is now done. Nothing has been tested yet. Also added a new interface and two new classes to hold the spot data when it is picked out from the database.

comment:8 Changed 9 years ago by martin

(In [744]) References #117 Corrected a package name. Also changed the way global average intensity is calculated in the AverageNormalization? plug-in. It is now calculated by the database instead of the plug-in.

comment:9 Changed 9 years ago by martin

(In [745]) References #117 Bug-fixing

comment:10 Changed 9 years ago by martin

  • Resolution set to fixed
  • Status changed from assigned to closed

(In [748]) Fixes #117 Create average nomralization plug-in.

Note: See TracTickets for help on using tickets.