Changes between Version 1 and Version 2 of uk.ac.ebi.Tab2MageExporter


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Timestamp:
Aug 15, 2007, 3:33:41 PM (15 years ago)
Author:
basepluginswiki
Comment:

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  • uk.ac.ebi.Tab2MageExporter

    v1 v2  
    55Exports raw data files and an experiment meta-data in tab2mage specification from BASE.
    66
     7== Long description ==
     8
     9The Tab2Mage export  plugin exports an experiment meta - data and annotations in tab2mage specification from BASE. The tab2mage specification is provided by the microarray  informatics team at the EBI, Cambridge. The exported experiments along with the raw data and image files can later be exported by the corresponding tab2mage import plugin. (link).
     10
     11The entry point for this plugin in base is the detail view page of an experiment. Hence, the user needs to create an experiment and all the annotations and parameters first. select and click on an experiment and on the edit page, click on the export tab and follow subsequent instructions.
     12
     13
     14== Prerequisites ==
     15
     16Base 2.2.1 and above [[BR]]
     17
     18AnnotationTypeCvImporter Plugin – For loading annotation types.  This must have a configuration that could import an annotation types (.txt) file.[[BR]]
     19
     20
     21
     22== Documentation ==
     23
     24The [http://lev.thep.lu.se/trac/baseplugins/browser/trunk/uk/ac/ebi/Tab2MageExporter/README.txt README.txt] contains information on how to install and use the plug-in.
     25
     26==== FAQs ====
     27
     28
     29== Maintenance plan ==
     30
     31Bugs will be fixed.
     32
     33== License ==
     34
     35[http://www.gnu.org/copyleft/gpl.html GNU General Public License version 2].
     36
     37
     38== Author ==
     39
     40Dominic Oyeniran – European Bioinformatics Institute, Cambridge, UK  [[br]]
     41http://www.ebi.ac.uk [[BR]]
     42[http://www.ebi.ac.uk/~oyeniran Project Page] [[BR]]
     43oyeniran@ebi.ac.uk
     44
     45Philippe Rocca- Serra – European Bioinformatics Institute, Cambridge, UK co -designer and domain expert. [[br]]
     46rocca@ebi.ac.uk
     47
     48
     49[http://lev.thep.lu.se/trac/baseplugins/browser/trunk/uk/ac/ebi/Tab2MageExporter/credit.txt Credit.txt].
     50
     51== Download ==
     52plugin jar file: [http://lev.thep.lu.se/trac/baseplugins/browser/trunk/uk/ac/ebi/Tab2MageExporter/Tab2MageExporter.jar?format=raw Tab2MageExporter.jar][[BR]]
     53
     54utils jar file: [http://lev.thep.lu.se/trac/baseplugins/browser/trunk/uk/ac/ebi/Tab2MageExporter/ebi-plugins-utils.jar?format=raw ebi-plugins-utils.jar][[BR]]