| 1 | = Affymetrix Array Design Batch Importer = |
| 2 | |
| 3 | == Short description == |
| 4 | |
| 5 | Imports affymetrix array design batch into BASE. |
| 6 | |
| 7 | == Long description == |
| 8 | |
| 9 | This plugin imports array designs for affymetrix - single channel- array design only. The entry point for this plugin in base 2 is the Array Design list page. Array LIMS->Array Designs. The array designs must be provided in a zip archive. The plugins will do the unpacking, creates the array designs using the array design file name and also attach the cdf, clf or bpmap file to the newly created array design. If an array design already exists, the plug-in skips the cdf, bpmap or clf file. Please note that only a user with an administrator role may execute this plugin. |
| 10 | |
| 11 | |
| 12 | == Prerequisites == |
| 13 | |
| 14 | Base 2.2.0 and above [[BR]] |
| 15 | |
| 16 | |
| 17 | == Documentation == |
| 18 | |
| 19 | The [http://lev.thep.lu.se/trac/baseplugins/browser/trunk/uk/ac/ebi/AffyArrayDesignBatchImporter/README.txt README.txt] contains information on how to install and use the plug-in. |
| 20 | |
| 21 | |
| 22 | == Maintenance plan == |
| 23 | |
| 24 | Bugs will be fixed and the plugin could be extended for 2 channel experiment too. |
| 25 | |
| 26 | |
| 27 | == License == |
| 28 | |
| 29 | [http://www.gnu.org/copyleft/gpl.html GNU General Public License version 2]. |
| 30 | |
| 31 | |
| 32 | == Author == |
| 33 | |
| 34 | Dominic Oyeniran – European Bioinformatics Institute, Cambridge, UK [[br]] |
| 35 | http://www.ebi.ac.uk [[BR]] |
| 36 | [http://www.ebi.ac.uk/~oyeniran Project Page] [[BR]] |
| 37 | oyeniran@ebi.ac.uk |
| 38 | |
| 39 | [http://lev.thep.lu.se/trac/baseplugins/browser/trunk/uk/ac/ebi/AffyArrayDesignBatchImporter/credit.txt Credit.txt]. |
| 40 | |
| 41 | == Download == |
| 42 | plugin jar file: [http://lev.thep.lu.se/trac/baseplugins/browser/trunk/uk/ac/ebi/AffyArrayDesignBatchImporter/AffyArrayDesignBatchImporter.jar?format=raw AffyArrayDesignBatchImporter.jar][[BR]] |
| 43 | |
| 44 | ==== Dependent jar ==== |
| 45 | utils jar file: [http://lev.thep.lu.se/trac/baseplugins/browser/trunk/uk/ac/ebi/Tab2MageExporter/ebi-plugins-utils.jar?format=raw ebi-plugins-utils.jar][[BR]] |