Changes between Version 5 and Version 6 of se.lu.thep.WeNNI
- Timestamp:
- Dec 5, 2008, 5:54:38 PM (16 years ago)
Legend:
- Unmodified
- Added
- Removed
- Modified
-
se.lu.thep.WeNNI
v5 v6 28 28 * Running WeNNI as a BASE plug-in makes WeNNI destined to impute log ratios of channel 1 and channel 2 (M values in BASE world). A consequence of imputing log ratios is that a change in ratio cannot be assigned to a specific channel. This implies that log(channel1*channel2) (A values in BASE world) become undefined and useless. However, on request from BASE users it was decided that A values should not be affected by the transformation in cases where the A value is well defined before imputation. In cases when an A value do not exist before transformation (i.e. channel1<=0 or channel2<=0) it was decided that A should be set to 0. NOTE, this does not change the underlying WeNNI algorithm in any way but is rather conventions needed for BASE plug-in usage. 29 29 30 30 31 = License = 32 31 33 The WeNNI software is available as a stand alone software package, or 32 34 as a plug-in to BASE, under the [http://www.gnu.org/copyleft/gpl.html GNU General Public License]. 35 33 36 34 37 = Download WeNNI = … … 42 45 or [source:plugins/base1/se.lu.thep.wenni/trunk browse the WeNNI svn repository]. 43 46 47 48 = Project statistics = 49 50 [http://dev.thep.lu.se/svndigest svndigest] generated [http://cbbp.thep.lu.se/~jari/svndigest/baseplugins/all/total/plugins/base1/se.lu.thep.wenni/trunk/index.html project statistics]. 51 52 44 53 === TODO === 45 54