Changes between Version 5 and Version 6 of se.lu.thep.WeNNI


Ignore:
Timestamp:
Dec 5, 2008, 5:54:38 PM (13 years ago)
Author:
Jari Häkkinen
Comment:

Added link to project statistics.

Legend:

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  • se.lu.thep.WeNNI

    v5 v6  
    2828 * Running WeNNI as a BASE plug-in makes WeNNI destined to impute log ratios of channel 1 and channel 2 (M values in BASE world). A consequence of imputing log ratios is that a change in ratio cannot be assigned to a specific channel. This implies that log(channel1*channel2) (A values in BASE world) become undefined and useless. However, on request from BASE users it was decided that A values should not be affected by the transformation in cases where the A value is well defined before imputation. In cases when an A value do not exist before transformation (i.e. channel1<=0 or channel2<=0) it was decided that A should be set to 0. NOTE, this does not change the underlying WeNNI algorithm in any way but is rather conventions needed for BASE plug-in usage.
    2929
     30
    3031= License =
     32
    3133The WeNNI software is available as a stand alone software package, or
    3234as a plug-in to BASE, under the [http://www.gnu.org/copyleft/gpl.html GNU General Public License].
     35
    3336
    3437= Download WeNNI =
     
    4245or [source:plugins/base1/se.lu.thep.wenni/trunk browse the WeNNI svn repository].
    4346
     47
     48= Project statistics =
     49
     50[http://dev.thep.lu.se/svndigest svndigest] generated [http://cbbp.thep.lu.se/~jari/svndigest/baseplugins/all/total/plugins/base1/se.lu.thep.wenni/trunk/index.html project statistics].
     51
     52
    4453=== TODO ===
    4554