Changes between Version 49 and Version 50 of se.lu.onk.IlluminaSNPNormalization


Ignore:
Timestamp:
Jan 15, 2009, 5:33:39 PM (13 years ago)
Author:
markus
Comment:

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  • se.lu.onk.IlluminaSNPNormalization

    v49 v50  
    1010
    1111=== News ===
     12
     13 * Jan. 15, 2009. tQN 1.1.1 released. This is a minor bug-fix release to handle not only NaN but also NA for missing values in files from !BeadStudio. !BeadStudio only outputs NaN but reformatting in for example Excel may change NaN to NA, which previously resulted in erroneous results from tQN.
    1214
    1315 * Dec. 16, 2008. Added support for an additional beadchip. tQN normalized cluster files for human1M-duo based on Illumina's !HapMap data set has been released.
     
    2729=== Download tQN ===
    2830
    29 [http://cbbp.thep.lu.se/~markus/software/tQN/tQN-1.1.0.zip?format=raw Download the latest stand-alone release (tQN-1.1.0)]. This release includes tQN cluster files for humanhap300, humanhap300-duo, humancnv370-duo, and humanhap550.
     31[http://cbbp.thep.lu.se/~markus/software/tQN/tQN-1.1.1.zip?format=raw Download the latest stand-alone release (tQN-1.1.1)]. This release includes tQN cluster files for humanhap300, humanhap300-duo, humancnv370-duo, humancvn370-quad, humanhap550, human610-duo, and human1M-duo.
    3032
    31 [http://cbbp.thep.lu.se/~markus/software/tQN/humancnv370-quad_tQN_clusters.txt.zip?format=raw Download tQN cluster file for humancnv370-quad].  [[BR]]
    32 [http://cbbp.thep.lu.se/~markus/software/tQN/human610-quad_tQN_clusters.txt.zip?format=raw Download tQN cluster file for human610-quad].  [[BR]]
    33 [http://cbbp.thep.lu.se/~markus/software/tQN/human1M-duo_tQN_clusters.txt.zip?format=raw Download tQN cluster file for human1M-duo].  [[BR]]
    3433
    3534=== Supplemental data ===
     
    4544''Installation''
    4645  Download and unzip the file available under the section ''Download tQN'' on this page.
    47 
    48   To be able to use additional supported types of beadchips, download the tQN cluster file for the beadchip under the section ''Download tQN'' on this page. Unzip and move the unzipped tQN cluster file to the subdirectory ''lib'' in your tQN directory.
    4946
    5047  OS X or Linux: