Changes between Version 42 and Version 43 of se.lu.onk.IlluminaSNPNormalization


Ignore:
Timestamp:
Dec 3, 2008, 3:47:35 PM (13 years ago)
Author:
markus
Comment:

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  • se.lu.onk.IlluminaSNPNormalization

    v42 v43  
    1313 * Oct. 17, 2008. tQN 1.1.0 released. New features include support for output format for [wiki:se.lu.onk.BAFsegmentation BAFsegmentation] and changed BAF and log R ratio calculations for SNPs having only homozygous clusters in !HapMap samples.
    1414
     15 * Dec. 3, 2008. Added support for additional beadchips. tQN normalized cluster files for humancnv370-quad and human610-quad based on Illumina's !HapMap data sets have been released.
     16
    1517=== Future plans ===
    1618
    17  * We are planning to release cluster files for humancvn370-quad and human610-quad.
     19 * We are planning to release cluster files for human1m-duo.
    1820
    1921=== License ===
     
    2325=== Download tQN ===
    2426
    25 [http://cbbp.thep.lu.se/~markus/software/tQN/tQN-1.1.0.zip?format=raw Download the latest stand-alone release (tQN-1.1.0)].  [[BR]]
     27[http://cbbp.thep.lu.se/~markus/software/tQN/tQN-1.1.0.zip?format=raw Download the latest stand-alone release (tQN-1.1.0)]. This release includes tQN cluster files for humanhap300, humanhap300-duo, humancnv370-duo, and humanhap550.
     28
     29[http://cbbp.thep.lu.se/~markus/software/tQN/humancnv370-quad_tQN_clusters.txt?format=raw Download tQN cluster file for humancnv370-quad].  [[BR]]
     30[http://cbbp.thep.lu.se/~markus/software/tQN/human610-quad_tQN_clusters.txt?format=raw Download tQN cluster file for human610-quad].  [[BR]]
    2631
    2732=== Supplemental data ===