Changes between Version 3 and Version 4 of net.sf.basedb.reggie/notes432


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Timestamp:
Sep 10, 2021, 2:11:59 PM (3 months ago)
Author:
Nicklas Nordborg
Comment:

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  • net.sf.basedb.reggie/notes432

    v3 v4  
    33**Note that BASE 3.19 is required for running Reggie 4.32.**
    44
    5 == A. Update Reggie ==
     5== A. Updated pipeline script ==
     6
     7The `singlecolumnaverager.awk` script has been updated (see #1325). Install the new version at a suitable location and make sure to update reggie-config.xml with the new path.
     8
     9== B. Update Reggie ==
    610
    711Update Reggie to version 4.32 as usual. Do not forget to run the Installation wizard. This will create and fix several new annotations, etc. It will still complain about File server items that need to be manually configured:
     
    1418Also, a new entry `<step-1-import>` is needed since the first Trimmomatic step is different in the import pipeline.
    1519
    16 == B. After updating Reggie ==
     20== C. After updating Reggie ==
    1721
    1822=== 1. Change existing software items ===