Changes between Initial Version and Version 1 of net.sf.basedb.reggie/notes427


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Timestamp:
May 18, 2020, 8:42:09 AM (4 years ago)
Author:
Nicklas Nordborg
Comment:

Started to write update instructions for Reggie 4.27

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  • net.sf.basedb.reggie/notes427

    v1 v1  
     1= Updating to Reggie 4.27 =
     2
     3**Note that BASE 3.16 is required for running Reggie 4.26.**
     4
     5== A. Before updating Reggie ==
     6
     7=== 1. Install new/updated pipeline scripts ===
     8
     9There are new pipeline scripts: http://baseplugins.thep.lu.se/browser/other/pipeline/trunk
     10Download and install at a suitable location on the prime cluster:
     11
     12 * `novaseq_status.sh`: Used by auto-confirmation to check status of !NovaSeq sequencing.
     13
     14=== 2. Install R-script for the Single Sample Predictor ===
     15
     16TODO
     17
     18=== 3. Import annotation types that are required for storing SSP results ===
     19
     20TODO
     21
     22
     23== B. Update Reggie ==
     24
     25Update Reggie to version 4.27 as usual. Do not forget to run the Installation wizard.
     26
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