Changes between Initial Version and Version 1 of net.sf.basedb.reggie/notes410

Timestamp:

Apr 28, 2017, 2:56:12 PM (8 years ago)

Author:

Nicklas Nordborg

Comment:

Started to write update notes for Reggie 4.10

net.sf.basedb.reggie/notes410

@@ +1 @@
+= Updating to Reggie 4.10 =
+
+The following changes can be made after installing Reggie 4.10.
+
+=== Update the !MultPieces annotation for Lysate items ===
+
+All '''Lysate''' items with a creation date after YYYY-MM-DD that has no value for the !MultPieces annotation
+should be update to `MultPieces=false`. It should be fairly simple to filter out the lysates in the web interface
+and then export the "Name" column. Open the exported file in a spreadsheet and add a second column for the
+!MultPieces annotation. Use the annotation importer to update the annotation.
+
+=== Set !ReferenceDate and !ReferenceDateSource on all Case items ===
+
+The !ReferenceDate and !ReferenceDateSource are new annotations that should be set on
+all existing Case item. There are four cases that depends on what information we already
+have about the case.
+
+ 1. All cases that has a value for the INCA_A030DiaDat annotation should be update to:
+    `ReferenceDate=INCA_A030DiaDat` and `ReferenceDateSource=IncaDiagnosisDate`.
+ 2. TODO
+ 3. Remaining cases that has a value for the !ConsentDate annotation should be updated to:
+    `ReferenceDate=ConsentDate` and `ReferenceDateSource=ConsentDate`.
+ 4. All remaining cases should be updated to:
+    `ReferenceDate=Registered` and `ReferenceDateSource=RegistrationDate`.
+
+1, 3 and 4 can be done with a simple export/import operation with the help of a spreadsheet to
+fill in the !ReferenceDateSource value.
+