Changes between Version 4 and Version 5 of net.sf.basedb.meludi.notes1_6_0

Timestamp:

Aug 24, 2022, 9:52:49 AM (2 years ago)

Author:

olle

Comment:

Updated section on MeLuDI configuration file

net.sf.basedb.meludi.notes1_6_0

@@ -75 +75 @@
 || '''XML tag name''' || '''Description''' || '''Value for original MeLuDI project''' ||
 || `name` || Name of the project item in BASE || `MeLuDi` ||
+|| `referral-prefix` || Prefix for referral item names in project || `` ||
+|| `referral-num-digits` || # Digits in referral item names in project || `` ||
 || `sample-item-prefix` || Prefix for sample item names in project || `ML` ||
 || `sample-item-num-digits` || # Digits in sample item names in project || `5` ||
+|| `blood-item-prefix` || Prefix for blood item names in project || `ML` ||
+|| `blood-item-num-digits` || # Digits in sample item names in project || `5` ||
+|| `ffpe-block-item-prefix` || Prefix for FFPE block item names in project || `ML` ||
+|| `ffpe-block-item-num-digits` || # Digits in FFPE block item names in project || `5` ||
 || `storage-box-prefix` || Prefix for storage box names in project || `ML_` ||
 || `storage-box-num-digits` || # Digits in storage box names in project || `4` ||
@@ -87 +93 @@
 || `libprep-kit-item-prefix` || Prefix for library preparation kit item names in project || `LP_kit_` ||
 || `libprep-kit-item-num-digits` || # Digits in library preparation kit item names in project || `3` ||
+|| `uses-site-prefix` || Flag indicating if site prefixes are used || `false` ||
+|| `site-prefix-hash-list` || Comma-separated list of comma-separated pairs of site prefix and site name || `` ||
+|| `uses-referral-creation` || Flag indicating if referral creation is used || `false` ||
+|| `uses-site-specific-referral-templates` || Flag indicating if site specific referral PDF templates are used || `false` ||
 || `project-focus-default` || Cancer type studied in the project || <empty string> (unknown) ||
 || `specimen-type-default` || Primary tumor or metastasis || <empty string> (unknown) ||