Opened 9 years ago
Last modified 9 years ago
#861 closed task
YellowLabel tracking wizard — at Initial Version
Reported by: | Nicklas Nordborg | Owned by: | Nicklas Nordborg |
---|---|---|---|
Priority: | major | Milestone: | Reggie v4.3 |
Component: | net.sf.basedb.reggie | Keywords: | |
Cc: |
Description
See #771.
Implement a new wizard for tracking and summarize the progress of specimen marked with YellowLabel.
The wizard should display information about active specimen (=specimen that has been annotated with the YellowLabel annotation but no report has been sent).
We need new annotations on the specimen level to track what to report and if a report has been sent or not.
ReportsToSend
: Enumerated annotation for specifying which reports to send. CurrentlyPilotReport
is the only value. It is possible for yellow specimen to have no value for this annotation.CompletedDate
: Date when processing this specimen has been completed including sending the requested reports (if any). It is assumed that all requested reports are sent at the same time.CompletedStatus
: Enumerated annotation that is set when a yellow specimen is considered complete. No value indicates a specimen that is in progress. Possible values need to be defined.
For each active yellow specimen the wizard should display:
- Name
- Arrival date
- Partition date
- RNA extraction date (Qiacube date)
- Flagged RNA
- Some info about library...
- Some info about sequencing...
- Some info about reports...
If the logged in user has enough permissions (PatientCurator?) it should be possible to perform actions on the specimen.
- Generate and package the reports in a zip file
- Mark specimen as completed
- More...?
This specification is not yet complete...