Opened 17 years ago
Last modified 17 years ago
#45 closed task
PLIER - Probe Logaritmic Intensity ERror — at Initial Version
| Reported by: | Peter Johansson | Owned by: | Jari Häkkinen |
|---|---|---|---|
| Priority: | major | Milestone: | |
| Component: | se.lu.thep.affymetrix | Keywords: | |
| Cc: |
Description
There appears two be alternative roads to incorporate PLIER.
PLIER is part of APT (Affymetrix Power Tools), which is a package of several commandline tools for different kinds of Affy data. As far as I can understand the whole package is licensed under GPL and mostly implemented in C++.
An alternative way appears through BioConductor, where PLIER is downloadable from http://www.bioconductor.org/download/oldrelease/bioc1.6/popular/plier.html
Perhaps the latter alternative is preferable as a connection to !BioC is not far away. Yet I present both roads here to let their pros and cons be discussed.
Note:
See TracTickets
for help on using tickets.
