Changes between Initial Version and Version 3 of Ticket #1535


Ignore:
Timestamp:
Nov 7, 2023, 1:21:28 PM (14 months ago)
Author:
Nicklas Nordborg
Comment:

Legend:

Unmodified
Added
Removed
Modified

  • Ticket #1535 – Description

    initial v3  
    11In the ASCAT package there is a function `ascat.metrics()` that generates more statistics. We should use this function and save the resulting information in a text file.
    22
    3 Some of the information should be imported as annotations, but it has not been decided yet.
     3Some of the information should be imported as annotations:
     4
     5 * n_segs: Number of copy-number segments
     6 * LOH: Fraction of the genome with LOH
     7 * GI: Genomic instability score