Opened 16 years ago
Last modified 16 years ago
#138 closed enhancement
Creating root bioassay sets from data stored in files only — at Initial Version
| Reported by: | Jari Häkkinen | Owned by: | Nicklas Nordborg |
|---|---|---|---|
| Priority: | critical | Milestone: | Illumina package v1.2 |
| Component: | net.sf.basedb.illumina | Keywords: | |
| Cc: |
Description
The Illumina package needs an import that can retrieve data from files rather than from the database.
One question is where the data from the file should be stored, in the raw data tables or in the dynamic tables? If I understand it correctly they should go into the raw data tables for performance reasons, and once imported to the raw tables data will be imported and available for all users of the same raw data. If we decide to store data in the dynamic there are ideas how to import only data that is needed currently. If more data is needed later, then another import could be performed for the additional data without changing the already imported data for that root bioassay. There are technical issues beyond my understanding that needs to be considered in deciding where to store the raw data.
