Changes between Version 3 and Version 5 of Ticket #1225


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Timestamp:
Jan 28, 2020, 12:48:19 PM (5 years ago)
Author:
Nicklas Nordborg
Comment:

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  • Ticket #1225 – Description

    v3 v5  
    2626**Swegen updated to version 20180409**\\
    2727We decided to use the newer hg38 version (`swegen_frequencies_fixploidy_GRCh38_20190204.vcf.gz`) instead of the hg19 version (`swegen_frequencies_hg19_20180409.tar`). 
     28
     29**SCAN-B tumor and normal samples databases**\\
     30These two databases need to be updated after the release and installation of Reggie 4.25. See #1208 and [wiki:net.sf.basedb.reggie/notes425 Reggie 4.25 update notes] for more information.
     31
     32**All other databases**\\
     33The other databases have not been updated:
     34
     35 * Danish genome
     36 * Low complexity regions
     37 * RNA edit databases
     38 * UCSC !RefGene and Repeats
     39