Changes between Version 8 and Version 9 of Ticket #1029, comment 168


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Timestamp:
Nov 9, 2018, 9:34:33 AM (5 years ago)
Author:
olle

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  • Ticket #1029, comment 168

    v8 v9  
    99 5. FFPE section (specimen) registration:[[BR]]a. A new annotation for "% Tumor cells" is needed, in addition to the one for "% Viable tumor cells".[[BR]]b. String "Viable" removed in "% Viable tumor cells".[[BR]]c. PAD exchanged for material number (FFPE block number).[[BR]]d. Two H&E glass items should be created for each FFPE section, with names consisting of FFPE block name plus suffix ".F" or ".E" (for "Före"/"Front" and "Efter"/"End", respectivly). Each H&E glass item should have the value of % tumor cells saved in an annotation.[[BR]]e. Specimens should be created without box storage data, as all section material will be used for extraction.[[BR]]f. DNA and RNA extract items with predetermined box positions should be created for each specimen, in order to adhere to the standard MeLuDI extraction pipeline.
    1010 6. Case Summary:[[BR]]a. Support for new FFPE block annotations should be added.[[BR]]b. Support for H&E glass items should be added, with report rows for annotation values for % tumor cells.[[BR]]c. Related item highlight feature should be imported from Reggie (when an item is clicked, downstream items with same beginning of name are shown with green background).
    11  7. MeLuDI should be updated for use with BASE version 10 before deployment (currently BASE version 7 is used).
     11 7. General/Other:[[BR]]a. MeLuDI should be updated for use with BASE version 10 before deployment (currently BASE version 7 is used).