Changes between Version 2 and Version 3 of net.sf.basedb.meludi.notes1_3_2


Ignore:
Timestamp:
Sep 24, 2015, 8:21:51 AM (5 years ago)
Author:
olle
Comment:

Minor changes to information on MeLuDI 1.3.2

Legend:

Unmodified
Added
Removed
Modified
  • net.sf.basedb.meludi.notes1_3_2

    v2 v3  
    33Updating to MeLuDI 1.3.2 might require some manual changes for items that already exist. This is due to the following decision (See ticket:802 for more information):
    44
    5  * Input of all lot numbers of interest is now performed in the first DNA/RNA extraction wizard, the "Lab tracking protocol for FFPE extraction" wizard, and the entered lot numbers are stored with the created start item list. Other DNA/RNA extraction wizards will obtain the default lot numbers from the input start item list.
     5 * Input of all lot numbers of interest is now performed in the first DNA/RNA extraction wizard, the "Lab tracking protocol for FFPE extraction" wizard, and the entered lot numbers are stored with the created start item list. Other DNA/RNA extraction wizards will now obtain the default lot numbers from the input start item list. (Previously, most lot numbers for processed start item lists were obtained from the first DNA extract on the list.)
    66
    77Consequences for older start item lists:
     
    1111A new wizard, "Update processed start lists with lot numbers from extracts", has been added to the "Special conversion tools" sub-section of the "Admin" section. It allows a number of processed start item lists to be selected from a menu (normally all start item lists are selected, if the conversion is performed directly after installing MeLuDI v1.3.2). For each selected start item list, new lot number annotations of the latter will be set to values of the corresponding annotations for the first DNA extract, or if no such extract exists, the first RNA extract (MeLuDI items are used if existing, otherwise extra material items). The new extraction operator annotation will not be set, as it was not defined for extracts prior to MeLuDI v1.3.2. The conversion tool is only needed once, after update to MeLuDI v1.3.2, and can therefore be removed in later versions.
    1212
    13 Older unprocessed start item lists do not state a problem, although they lack values for most lot numbers, since these will be added in the "DNA/RNA registration/quantification" wizard.
     13Older unprocessed start item lists do not state a problem, even though they lack values for most lot numbers, since these will be added in the "DNA/RNA registration/quantification" wizard.
    1414
    1515Follow this procedure: