Changes between Initial Version and Version 1 of Ticket #526, comment 4


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Timestamp:
Oct 8, 2014, 8:54:28 AM (10 years ago)
Author:
olle

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  • Ticket #526, comment 4

    initial v1  
    33The first version of the retraction wizard will only cover the initial steps of the retraction procedure:
    44
    5  a. Taking a case name (scan-b id) or patient item name as input, all stored items in the database will be listed for the related patient. If a case name is input, it is first used to find the patient, and then all cases (at most 2) for that patient are found. Information about items in all found cases are listed.
     5 a. Taking a case name (scan-b id) or patient item name as input, stored items in the database will be listed for the related patient. If a case name is input, it is first used to find the patient, and then all cases (at most 2) for that patient are found. Information about items in all found cases are listed.
    66 b. The user should be able to select a number of annotation changes, intended to prevent further analysis of some items types, e.g. RNA. For this to have the desired effect, it is both necessary that a Reggie wizard is used before the actual analysis, and that the wizard in question checks the value of the annotation in question, before allowing an item to be processed further.
    77 c. When marking data for a patient as retracted, the patient record (a `BioSource` item), should have its type changed from "`Patient`" to "`Retract`" or "`RetroNo`", and its item name to "`Retract`" or "`RetroNo`" + a 6-figure consecutive serial number for the subtype in question, e.g. "`Retract000009`" or "`RetroNo000012`". The wizard should suggest the new item type based on the previous patient type, but the user should be able to change it before the final registration.
    8  d. The wizard will required the user to have ''Curator'' preferences.
     8 d. The wizard will require the user to have ''Curator'' preferences.
     9