Changes between Version 1 and Version 2 of Ticket #461, comment 7


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Timestamp:
Feb 6, 2013, 7:41:35 AM (11 years ago)
Author:
olle

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  • Ticket #461, comment 7

    v1 v2  
    1212|| '''Chart data''' || '''Quantity used''' || '''Date used''' || '''Status''' ||
    1313|| Original tissue quantity || `sample.getOriginalQuantity()/1000.0f` || Annotation value `QIACUBE_DATE` of extract from lysate from sample || OK ||
    14 || Quantity tissue used || `extract.getCreationEvent().getUsedQuantity(sample)/1000.0f` for extracts from sample (may be more than one extract/sample) || Annotation value `QIACUBE_DATE` of extract from lysate from sample || OK ||
     14|| Quantity tissue used || `extract.getCreationEvent()` `.getUsedQuantity(sample)/1000.0f` for extracts from sample (may be more than one extract/sample) || Annotation value `QIACUBE_DATE` of extract from lysate from sample || OK ||
    1515|| Histology piece quantity || `sample.getOriginalQuantity()/1000.0f` for histology sample || Annotation value `PARTITION_DATE` of histology sample || Partial resemblance ||
    1616|| Remaining tissue quantity || ` sample.getRemainingQuantity()/1000.0f` || Annotation value `QIACUBE_DATE` of extract from lysate from sample || OK ||
    1717|| Total quantity DNA used || `extract.getOriginalQuantity()` for DNA extract || Annotation value `QIACUBE_DATE` of DNA extract || OK ||
    1818|| Total quantity RNA used || `extract.getOriginalQuantity()` for RNA extract || Annotation value `QIACUBE_DATE` of RNA extract || OK ||
    19 || DNA yield (µg/mg tissue) || `extract.getOriginalQuantity()` for DNA extract divided by `extract.getCreationEvent().getUsedQuantity(sample)/1000.0f` for extracts from sample || Annotation value `QIACUBE_DATE` of DNA extract || OK ||
    20 || RNA yield (µg/mg tissue) || `extract.getOriginalQuantity()` for RNA extract divided by `extract.getCreationEvent().getUsedQuantity(sample)/1000.0f` for extracts from sample || Annotation value `QIACUBE_DATE` of RNA extract || OK ||
    21 || DNA yield corrected for lysate volume (µg/mg tissue) || 2 x `extract.getOriginalQuantity()` for DNA extract divided by `extract.getCreationEvent().getUsedQuantity(sample)/1000.0f` for extracts from sample || Annotation value `QIACUBE_DATE` of DNA extract || Resemblance OK ||
    22 || RNA yield corrected for lysate volume (µg/mg tissue) || 2 x `extract.getOriginalQuantity()` for RNA extract divided by `extract.getCreationEvent().getUsedQuantity(sample)/1000.0f` for extracts from sample || Annotation value `QIACUBE_DATE` of RNA extract || Resemblance OK ||
     19|| DNA yield (µg/mg tissue) || `extract.getOriginalQuantity()` for DNA extract divided by `extract.getCreationEvent()` `.getUsedQuantity(sample)/1000.0f` for extracts from sample || Annotation value `QIACUBE_DATE` of DNA extract || OK ||
     20|| RNA yield (µg/mg tissue) || `extract.getOriginalQuantity()` for RNA extract divided by `extract.getCreationEvent()` `.getUsedQuantity(sample)/1000.0f` for extracts from sample || Annotation value `QIACUBE_DATE` of RNA extract || OK ||
     21|| DNA yield corrected for lysate volume (µg/mg tissue) || 2 x `extract.getOriginalQuantity()` for DNA extract divided by `extract.getCreationEvent()` `.getUsedQuantity(sample)/1000.0f` for extracts from sample || Annotation value `QIACUBE_DATE` of DNA extract || Resemblance OK ||
     22|| RNA yield corrected for lysate volume (µg/mg tissue) || 2 x `extract.getOriginalQuantity()` for RNA extract divided by `extract.getCreationEvent()` `.getUsedQuantity(sample)/1000.0f` for extracts from sample || Annotation value `QIACUBE_DATE` of RNA extract || Resemblance OK ||
    2323|| RNA QC SCANB, RQS otherwise RQS~RIN || Annotations `CA_RQS` and `BA_RIN` for RNA extract || Annotation value `QIACUBE_DATE` of RNA extract || Missing data, order of magnitude OK ||
    2424|| Minutes to RNAlater || Difference between annotation values `RNALATER_DATETIME` and `SAMPLING_DATETIME` for specimen sample, converted to minutes || Annotation value `QIACUBE_DATE` of extract from lysate from sample || Extra data, order of magnitude OK ||